Cyprinus carpio (common carp): 109053831
Help
Entry
109053831 CDS
T05134
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b isoform X1
KO
K09444
interferon regulatory factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109053831 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109053831 (irf1b)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109053831 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
DUF6672
Motif
Other DBs
NCBI-GeneID:
109053831
NCBI-ProteinID:
XP_018926678
Ensembl:
ENSCCRG00000037300
UniProt:
A0A8C1RIE2
LinkDB
All DBs
Position
A21:21810842..21813407
Genome browser
AA seq
288 aa
AA seq
DB search
MPVSRMRMRPWLESRIDSNTIAGLVWVNKEEKMFSIPWKHAARHGWEVDKDACLFKQWAI
HTGKYKEGFTAPDPKTWKANFRCAMNSLPDIEEVKDKSINKGCGAVRVYRMLPAVTKKKV
KRCKSRDSRKRKVKTEETDAHEMHTEMTQENTIDSTVNLSTVSPSNDTPAYEVEIANCPE
ELYISKFQVSPVHSTDLEENEAIFELTRQLERESTQWLQNNFCGKGFLANEVATTESLSP
ESQWSESSGEELEFRLYTELTPDLREDSLCTYTELWNSSSMPQTMCPL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtccagaatgcgcatgcgaccctggctggagagcagaatcgactccaacacc
atcgctggactcgtgtgggtcaacaaggaagagaagatgttctccatcccgtggaaacac
gcggctcggcacggctgggaggtggacaaagacgcctgtctgttcaagcagtgggccatt
cacacaggtaaatacaaggagggatttaccgcacctgaccccaaaacctggaaagccaat
ttccgctgtgccatgaactcgctccccgacatcgaagaggtgaaggacaagagcatcaac
aaaggctgcggtgcggtgagagtctaccgcatgcttcccgccgtcaccaagaagaaagtc
aagagatgcaagagccgcgacagccgcaaacgcaaggtcaagacggaggagactgatgct
cacgagatgcacacagaaatgactcaggagaacaccatcgacagcaccgtcaatctaagc
accgtcagcccctccaatgacacccccgcatatgaggtggaaatcgcaaactgtccagaa
gaactgtacatcagcaagttccaggtgtcaccggtgcattcgacagacttggaggagaac
gaagctatctttgagctcacacggcaattggaacgagaaagtacgcagtggctgcagaac
aatttctgtggaaaggggttcctggccaatgaagtagccacaacagaatctctgagtcca
gagagccaatggagtgaaagctcaggagaagagctggagtttcggctctacactgaactg
accccagacctgcgtgaagactctctctgcacctacacagagctgtggaacagcagctcc
atgccacagaccatgtgtcctctctga
DBGET
integrated database retrieval system
