Cyprinus carpio (common carp): 109055409
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Entry
109055409 CDS
T05134
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109055409 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109055409 (crnkl1)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109055409 (crnkl1)
Spliceosome [BR:
ccar03041
]
Complex B
Other components
Prp19-related factors
109055409 (crnkl1)
Complex C
109055409 (crnkl1)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
109055409 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
TPR_12
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
109055409
NCBI-ProteinID:
XP_042603291
UniProt:
A0A9R0ANV1
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All DBs
Position
B20:complement(22608994..22617416)
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AA seq
758 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDAEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNITLWLKY
AEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNIAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKSRSIYENFVMVHPEVKNWIKYAHFEEKHGYIALARKVFERA
VEFFGEEHISESLYVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDTDADTVREVYERAIANTH
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQF
EIRQKNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFAELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRL
LQRTQHVKVWISYGQFELSIDSDDRIQRCRQIYEEANKSMQNCEEKEERLMLLESWRDFE
DEFGSLANKERVWKLLPEKVKKRRKITAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKKQQQQEDEEEQEEEEEEEEEEEEEEEGAQQVPQGKEAQESPEPEEQGPAAQREQPE
NEYDDRDDESSSSSDSESDGGDREDDKTEQTKADTENH
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccgcggcgggtaaacagagaatcccgaaagtggcaaaggtgaagaataaa
gccccagcagaggtgcagatcaccgcagagcagctgctcagagaggcgaaggagcgagag
ctagagctgctgcctcctccgccgaaacagaagatcactgatgcagaagagctcaacgac
tataaactgaagaagaggaaggggtttgaagacaacatcaggaagaacagaactgtcatc
agcaactggatcaagtacgcacaatgggaggagagcctgaaggaggtccagagagctcgc
tctatatacgagcgtgcgctcgacgtggatcaccgcaacatcacgctgtggctgaagtat
gcagagatggagatgaagaaccggcaggtgaatcacgctcgcaacatctgggaccgagcc
atcaccatcctgccccgtgtcaatcagttctggtacaagtacacctatatggaggagatg
ctggggaacattgccggctgtaggcaggtgtttgagcgctggatggagtgggagccggag
gaacaggcctggcattcctacatcaactttgagctgcgctataaggaagtggacaagtcc
cgcagcatctatgagaatttcgtgatggtccatcctgaagtgaagaactggatcaagtat
gctcacttcgaagagaagcacggttacatcgccctggcgaggaaagtgttcgagagagct
gtagagttttttggtgaggagcatatcagcgagagcctctacgtggcttttgccagattc
gaggagaagcagaaagagtttgagagagttcgtgtcatctataaatacgctttggacagg
atccccaagcaacaggcccaggagctgtttaagaactacacagtgtttgagaagcggttt
ggagacaggagaggaattgaggatgtgatcgtcagcaaaaggaggtttcagtatgaagag
gaagtcaaggcaaacccacacaattatgatgcgtggtttgattacctgcggctggtggag
agtgacaccgatgcagacacggttagagaagtgtacgagagagccatagccaacacacac
cccatccaagagaagagacactggagacgctacatctacctgtggattaactacgctctg
tacgaggagctggaggtcaaggaccctgagagaacgaggcaggtgtatcaagcgtgtctg
gagcttataccacacaaaaagtttacctttgccaagatttggctcttatacggacagttt
gaaatccgacaaaaaaacctccagaatgctagacgaggcctgggcacagccatcggaaag
tgtccgaaaaacaaactgtttaaaggctacatcgagctggagctacagctgagggagttt
gaccgctgcaggaagctctacgagaagtatctggagttcagtccagaaaactgcaccacc
tggatcaagtttgccgagctggagaccatcctgggagacacagaacgggccagagccata
tttgaactggctattggacaaccacgactcgacatgccagaggtgctgtggaagtcatac
atcgactttgagatcgagcaagaagaatacgacaacacacgaggactttataagagactg
ttacagcgtactcaacatgtcaaagtctggatcagctatggccagtttgagctgtccatc
gacagtgacgaccgcatacagcgatgcagacagatctacgaggaggccaataagagtatg
cagaactgtgaggagaaggaggaacgtctgatgctcctggagtcctggagagactttgag
gatgagtttggatcattagccaacaaggagagagtctggaaactcctgccggagaaggtg
aagaagaggaggaagatcacagcagaggacgggtcggatgcaggttgggaagaatattac
gactacatcttccccgaggacgctgccaaccagcccaacctcaaactgctggccatggcc
aagatgtggaagaaacagcagcagcaggaggatgaggaagagcaggaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaaggagcacagcaggtccctcaagggaaggaa
gcacaggagagcccagaaccagaggagcagggacctgcagcccaaagagaacagcctgaa
aatgagtatgatgatcgtgacgatgagagcagcagcagtagtgacagcgaaagtgatggt
ggcgaccgtgaagatgacaagacggaacaaacaaaagcagacacagaaaatcactga
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