Cyprinus carpio (common carp): 109056576
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Entry
109056576 CDS
T05134
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109056576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109056576
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109056576
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_14
TPR_12
TPR_8
ANAPC3
TPR_7
ARM_TT21
TetR_C_5
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
109056576
NCBI-ProteinID:
XP_042627935
UniProt:
A0A9Q9YY74
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Position
A16:2405039..2416186
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AA seq
748 aa
AA seq
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MAETGSDQAGDMKHDSVSSPGISDQEREMATSAFEAFKAGSYDVSLKHLDSLQELNKEDY
KITMNKAITEFYKSGQTTTSTLKQTLMTLKNQMHTAVDDIDGLDDVENSILNYNQAVIYY
HMRQYSEAISIGEKLYQFLEPFEKFAQAVCFLLVDLYLLTFQPEKALHLLAVLEKLTVKD
GNSKNGKGESTNSANKESSSLKAEFTAMIEAAKSKMHQYKVRAYIQMKSLKACKREIKSV
MNTSGNSAPSLFMKSNFEYLRGNYRKAVKLLNSSNIAEHPGPLKTGECMRCMFWNNLGCI
HFAMGKHNLGLFYFKKALQENDHVCAQLGDGSNGQATKKFTGIPMCALLANKRYELLYNC
GIQLLHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCITANKGSSEQETKGLPSKKGIV
QAVVGQGYHRKIVLASQSTQNTIYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQHDSK
PDNGSKSCSQSGSTESGSETSDACSGKTQEGDKFIPAAPSSPLRKQEVENLRCSILACSA
YVALALGDNLMALNHAEKLLHQTKLSGSLKFLGHLYAAEALISLDRISDAIAHLNPENVT
DVSLGVSSSEQDQGSDKGDLEPVESSGKQTPLCYPSSVSSARSTMLFNLGSAYCLRSEYE
KARKCLHQAASMVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPSVKPASSPDL
RKKPLPFQSSQPVQPIQTPSSFTQVQRK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacaggctcagatcaagctggagacatgaaacatgacagcgtttcgtctcct
gggatctccgatcaagagagggagatggcaaccagtgcttttgaggcatttaaggctgga
agctatgacgtgtccctgaaacaccttgacagccttcaggagcttaacaaagaggactac
aagattacaatgaataaagcgatcactgagttttataaaagtgggcagacaacaactagc
accctgaagcagacgttaatgactttaaagaatcagatgcacacagctgtggatgatatt
gatggtttggatgatgtcgagaacagtattctcaactacaatcaagcagtgatttattac
cacatgcggcagtattcagaagctatatccatcggggagaagttgtaccagtttcttgaa
ccttttgaaaagtttgctcaggccgtttgtttcttgttggtggatctatacctgctcacc
ttccagccagagaaggcactgcacctgttggctgtgctggagaagctcactgtgaaggat
gggaacagcaaaaatggcaaaggagagagcaccaacagcgcaaataaggagtcttcttct
ctgaaagcagagttcacagctatgatcgaggcagctaaatcaaagatgcaccagtataaa
gtgcgagcctatatccagatgaagtcactgaaggcctgtaaacgggaaatcaaatctgtg
atgaacacatctggaaattctgcgccctcactcttcatgaagagtaattttgagtatttg
aggggaaattatcgtaaagctgtgaaactcctcaacagttcaaatatcgcagagcatccg
ggacccttgaaaacaggtgaatgcatgaggtgtatgttctggaataatcttggttgtatc
cattttgccatggggaagcacaatctgggtcttttttactttaaaaaagcacttcaagaa
aatgaccatgtatgtgcccagcttggtgatggcagtaatggacaggcaactaagaagttc
acaggcatccccatgtgtgctctgttagctaataagcgctatgagctgctgtataactgt
gggattcagttacttcatatcggccgaccgctggcagcgtttgagtgtctgatggaggcg
gtgcaggtgtatcactccaaccctcgactctggctcagactcgcagaatgctgcatcaca
gctaataaagggagctcggagcaggaaacaaaaggtttacccagtaaaaaggggattgtg
caggctgttgttgggcaaggctaccatcgcaagattgttttagcatcacagtccacacag
aacaccatctacagtgagggccagtcagcagcaatcccagtggcaagtatggagtttgca
gcaatctgtctgcgtaacgctttgctcctgctcccagagcaccaacagcacgatagcaaa
cctgacaatggctccaagagctgcagtcagtcaggcagcacagaaagtggcagcgagacc
agtgatgcctgcagtgggaagactcaagagggagacaagttcattcctgctgccccctcg
tcacccttaagaaagcaggaggtggagaatctcagatgctcaattctagcctgcagtgca
tatgtggctcttgctcttggggacaacttaatggctctgaatcatgcagaaaagcttcta
catcagacaaagctgtcaggatcgctcaagttcctgggtcacctgtatgctgctgaagcc
ctgatctctttggacagaatctctgatgccatagcacatcttaacccagagaacgttact
gatgtctcattaggtgtgtcctccagcgaacaagaccaaggttctgataaaggagatctg
gagcctgtggagtcctcagggaagcagacgcctttatgttaccctagctcagtaagttct
gcccggtccacaatgctcttcaacctgggcagtgcgtattgcttgaggagtgagtacgag
aaagcccgcaagtgcctccatcaggctgcttcaatggtgaacactaaggagattcctcca
gaagccattttactgggtgtttacttagaactgcagaacggaaacacacagctggcgcta
cagatcatcaaacggaaccagctcctcccgtctgtcaagcccgcctcctcccctgacctc
cgtaagaaaccacttcccttccagtcgtcccagcctgtacaacccatacagaccccctcc
tcctttacacaagtacagcgcaagtga
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