Cyprinus carpio (common carp): 109057047
Help
Entry
109057047 CDS
T05134
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109057047
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109057047
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109057047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Motif
Other DBs
NCBI-GeneID:
109057047
NCBI-ProteinID:
XP_042573123
UniProt:
A0A9Q9VXQ2
LinkDB
All DBs
Position
B1:29992427..29998964
Genome browser
AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQTAVDSAVPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSNVKCAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaacgatgttgataatgagctgctggactatgaggaagacgaggagccacag
accgccgtggacagtgcagtcccagctggcaagaaggaggtgaaaggctcctacgtctcc
attcacagctccggcttccgcgatttcctcctgaaaccagagctgctccgcgcgatcgtt
gactgtggctttgagcatccttctgaggtccagcatgagtgcattccacaagccatcttg
ggtatggacatcctgtgccaggcaaagtctggtatgggaaaaactgccgtgtttgtgctt
gccacacttcaacagatcgagccagtggatgggcaggtttctgtgttggttatgtgccac
acacgtgaactggcctttcagatcagtaaagagtatgagcgcttctccaagtacatgtcc
aatgttaaatgtgctgtcttcttcggtggtttgtccataaagaaggatgaggaagtgctc
aagaagaactgccctcacattgtagtgggaacaccaggaagaatccttgccctcattcgc
aacaagaccttgaacctcaaaaatgtcaaacactttgtgttggatgaatgcgacaagatg
ttggagcagctagatatgagacgggatgtccaggaaatcttcagactgacccctcacgag
aagcagtgcatgatgttcagcgccacattaagcaaagagatcagaccggtgtgtcgcaaa
ttcatgcaagatccaatggaggtgtttgttgatgacgagactaagcttaccctgcatggt
cttcagcaatactacgtcaaactgaaggatagcgaaaagaaccgcaagctgtttgacctg
cttgacgttctcgagtttaaccaggtggtgatatttgtcaagtcagttccacgatgtgtg
gctctgtctcagctgttggttgaacagaatttccctgccattgcgatccacaggggaatg
gctcaggaagaaagattgtcccgttatcaacagttcaaagattttcaacggcggatcctg
gtggctactaatctgtttggtcgtgggatggatatcgagcgtgttaatatagttttcaac
tatgacatgcctgaagattcagacacgtatctacacagggttgctcgtgctggtaggttt
ggtacaaaaggattggctgtcacctttgtgtcagatgagacggatgcaaagaccctgaat
gatgtgcaggaccgttttgaagtcaacgtcgctgagttgcctgaggaaatcgacatctcc
acctacattgagcagtccagatga
DBGET
integrated database retrieval system
