Cyprinus carpio (common carp): 109062350
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Entry
109062350 CDS
T05134
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04621
NOD-like receptor signaling pathway
ccar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109062350 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109062350 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109062350 (nod1)
Pattern recognition receptors [BR:
ccar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109062350 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
NOD2_WH
LRR_4
AAA_16
AAA_22
NTPase_1
AAA_18
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
109062350
NCBI-ProteinID:
XP_018934984
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MGSYKSEGSHLKLLTSHRELLVERVKNTQCVLDNLQMNGFICTEDIEIIHRSSTKTDQVR
KILELVQSKGEECSAYFVHVLHEAYDAYIDLRPWFEEIRYTPLDTISVIPVVNTDPISKY
CEKLRYELGRDTQFITSYSKREETPLEDLYTDTQMELLNDRGESLGYLQSLDELLGDQGV
FNPQAETIFITGDAGVGKSIVLQKLQNLWSRRELKTRAKFFFKFRCRMFSTFKETDEISL
KDLIFKHNCYPDGDLDNEVFTYILRFPETVLFTFDGYDEIQTDFDLDNVPETVSPEEKTR
PLLLLMNLLCGKLLKGSRKIMTARSGTEIQSRVIWKKVYMKGFSPEHLKRYTALHFPETE
HRKMVTDQLDANPHLCGLCSIPLFSWIILKSFKHLHSVYDNFELPDSCITLTNVFLLLSE
VFLGHSTARPGLLKGSTRCPTETFKAGEQKLAAFARLALNGLQRGGLVFSMEEVTSCGLE
DEVLQFGFLRPASHYDGCGGSATFEFLHETLQAFLAAFSLVLDSKITPESILSFFSKCEY
KRSSHFSCMPCLGKSRPRDKDPFQTNFQFTNLFLCGLLSKPNAALLEHLVPPALLKQKRK
MLKSYLSNSVRTHLKGLPRYPSTDIDGDKVHAMPNFLWMLRCIFETNSEEVAKMTANGIS
ADYIKIAFCNIYSADCSALNFVLHHRRKHLGVDMDNNNINDYGVKQLRPSFSKMTVVRFC
VNQLTDSSIEVLAEELIRHKVVRVLGLYKNYITDVGAKLVAKIIEECPHLRVVKLGCNNI
TGVGGKYLASAIHKSKSIFDVGMWGNTIGDEGADAFAEALKNHPSLTNLSLSANGITSHG
GRSLAKALKENKSLHIFWLIQNKISDDAASDFADAFRSNSALTHLMLIENEFTIHGAKEM
SEGLTNNTTLKEVNIKGSRVSEEEEQLYEGDKRLRFH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttacaagagtgagggctctcacctgaagctgttgacttcacaccgagagctg
ctggtggagcgcgtgaagaacacgcagtgtgttctggacaatctccagatgaacggcttc
atctgcaccgaagacatcgagatcatacaccgcagcagcaccaaaactgaccaggttcgc
aaaatcttggagctggttcagagtaaaggagaggagtgctccgcatatttcgtacacgtt
cttcatgaagcatacgatgcttacattgatctgcggccttggtttgaagaaattcggtac
acaccattagacactattagtgtcataccagtggttaacacagaccccattagcaagtac
tgcgagaagctcagatatgagctgggaagagacactcagttcatcacgtcgtactcgaag
agggaggagacgccgctggaggatctttacacggacactcagatggagctcttgaatgac
agaggtgagagtttgggatacttacagagtctggatgagcttctgggagaccagggagtc
ttcaacccgcaggccgagaccatcttcatcaccggcgacgccggcgtaggcaaatcgatc
gttcttcagaaactgcagaatctgtggtccagaagggagctgaagactcgcgccaagttc
ttcttcaagttcagatgcaggatgttcagcacctttaaagagaccgacgagatctcgctg
aaggatctgatctttaaacacaactgctatccggacggcgacctcgacaacgaggtcttc
acctacatcttacgattcccagagacggtgcttttcacctttgacggatacgatgaaatc
caaacggattttgatttggataacgtgccggaaacggtttccccggaagaaaagacccgt
ccacttttgcttctcatgaatttgctttgcggaaaactgctcaaaggttcccggaagatc
atgactgcacgaagtggcaccgagatccaaagcagagtgatctggaagaaggtctatatg
aagggattctcccctgaacacctgaagagatacacagctttgcatttcccagagacggaa
cacaggaaaatggtgaccgatcaactggacgccaatcctcacctctgcggtctttgctcc
atcccgttgttcagctggatcatcctcaagagcttcaagcatctccattcagtgtatgac
aactttgagttgccggattcttgcattacgctcacaaacgtcttcttgcttctctccgag
gtctttcttggacactcgactgcacgtcctggtcttttaaaagggagtacgaggtgtcct
acggagacttttaaagctggtgagcagaagcttgcggccttcgctcgactcgccttgaat
ggtctccaacggggaggacttgtgttcagtatggaggaagtgacatcctgtggattagaa
gatgaagtgcttcagtttgggtttctgaggcctgcttctcattacgatggatgcggaggc
tctgcaaccttcgagtttctccacgagaccctccaggccttcttagcggcgttttcattg
gtgctggactccaaaatcactcctgaatctattctaagtttcttctccaaatgcgaatac
aagaggtcgtcgcatttctcctgcatgccttgcttgggaaagtcgagacctagagataaa
gaccctttccaaaccaacttccagttcaccaatttattcttatgtggcctcttgtccaaa
cccaacgcggcactcctggagcatctcgttcctccggcgctattgaaacagaagcgcaag
atgctcaagtcttatctgtcaaacagcgtgaggacacatcttaaaggccttcctcgatat
ccatccacagacattgatggtgacaaggtgcatgcaatgccaaacttcttgtggatgctg
cggtgcatatttgagacgaacagcgaggaggttgccaagatgacggccaacggcatatcg
gcggattacattaagatcgccttctgtaacatttactcggctgactgcagcgcattgaac
tttgtcctccaccaccgtaggaagcacctgggggtcgacatggacaataacaacatcaac
gattacggcgtgaagcaactgagaccctccttcagcaaaatgacagtagtaagattttgc
gtgaatcagctcacggacagcagtattgaggttctggcagaggaactcatcagacacaaa
gtcgttagggtcttggggctttacaaaaactacatcacagatgttggagccaaactagtt
gcaaagatcattgaagaatgtccacacttgagggtcgtcaagctcggctgcaataacatc
acaggtgtgggtgggaagtaccttgccagtgcaattcacaagagcaaatctatctttgat
gtaggaatgtggggaaacaccatcggtgacgagggcgcagatgcgtttgcagaggctctg
aagaatcacccaagcctgaccaatctcagtctctctgccaatggcataacgtctcacggt
ggaagaagtctggcaaaagcactgaaggaaaacaaaagccttcacatcttctggttgata
cagaacaaaatctctgatgatgcagcgtcggactttgctgatgccttcagatccaactct
gctctgacgcatctgatgctaatagaaaatgagttcaccatacatggagccaaagagatg
tctgaaggcctgactaacaacactacactgaaggaagtcaacattaaaggaagccgggtt
tctgaagaagaagaacaactctatgagggtgacaagaggcttcgcttccactga
DBGET
integrated database retrieval system
