Cyprinus carpio (common carp): 109078551
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Entry
109078551 CDS
T05134
Symbol
tia1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109078551 (tia1)
03041 Spliceosome [BR:
ccar03041
]
109078551 (tia1)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109078551 (tia1)
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109078551 (tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
Nup35_RRM_2
RRM_Nup35
RRM_3
DUF1866
Motif
Other DBs
NCBI-GeneID:
109078551
NCBI-ProteinID:
XP_042580914
Ensembl:
ENSCCRG00000025624
UniProt:
A0A8C1NEI4
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All DBs
Position
B5:23503957..23513485
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AA seq
386 aa
AA seq
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MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDAAGNDPYCFVEFFEHRHA
AASLAAMNGRKIMGKEVKVNWATSPSSQKKDTTNHFHVFVGDLSPEITTDDIRAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNAKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSVEGHIVKCYWGKETTDMVSPMQQVQVPQQNKVGFAAQ
PYGQWGQWYGNAQQISQYVPNGWQVPTYSVYGQAWNQQGFNHIQAGAGWPGVSAVSNGGV
VEPAQGVNGTVLANHSSMGTAGYHTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgagcagcccaagaccctgtatgtaggaaacctgtcacgggatgtgacc
gaggcccttataatgcagctctttggtcaaattggcccctgcaagagttgtaaaatgatt
gtggatgcggcaggtaacgatccatactgctttgtggagttcttcgagcataggcacgca
gcggcctcactcgcagctatgaacgggcgtaaaataatgggtaaggaggtaaaggtcaac
tgggctacgtcacctagcagccagaaaaaagacacaaccaatcacttccatgtctttgtt
ggagacctcagtccagaaatcaccactgatgacatcagagctgcctttgcaccctttggg
aggatatcagacgcacgtgtagtcaaagacatggcaacggggaagtcaaaaggctatggt
tttgtttcattcttcaacaagtgggatgcagagaatgccattcagcaaatggggggtcag
tggttgggcggcaggcagatcaggactaactgggctacaagaaaacccccagcgcctaaa
gcaacctatgaaacaaatgccaagcacttgtcgtttgatgaagtggtgaaccagtccagc
cccagcaactgcactgtgtattgtggcggagtcactacaggccttacagaacaactcatg
agacagaccttttccccatttggtcaaatcatggaaattcgagtgtttccggacaaaggc
tactcgtttgtgaggttcaactctcacgaaagtgcagctcatgccatagtgtctgttaat
ggcacgtctgtagaaggtcacatagtgaaatgttactggggtaaagagaccacagacatg
gtgagccccatgcagcaggtgcaggtaccccagcagaacaaagttggttttgctgcacaa
ccatatggccagtggggacagtggtacggcaacgcacaacaaattagtcagtacgtccct
aacggctggcaggtacccacttacagtgtgtacggacaggcctggaaccagcagggcttc
aatcacatacaggctggtgctggatggcccggtgtgagcgccgtgagtaacggaggcgtg
gtggagcctgcgcagggagtcaacgggaccgtgctagccaatcattccagcatgggcact
gcaggataccacacacactga
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