Cyprinus carpio (common carp): 109089048
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Entry
109089048 CDS
T05134
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109089048
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109089048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
RhlB
FUT8_N_cat
IQ
Motif
Other DBs
NCBI-GeneID:
109089048
NCBI-ProteinID:
XP_042613773
Ensembl:
ENSCCRG00000048804
UniProt:
A0A9Q9Y512
LinkDB
All DBs
Position
A6:complement(8158804..8182189)
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AA seq
1626 aa
AA seq
DB search
MTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVAMAYDEQNQATIEEAQ
QKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGGLSEESSSGGSRLSSKSAKERRN
RRKKRKQREEEEKADQEKFHKSISEDSIRRPGFRFSIDANRLSYEKKCSTPNQSLLSIRG
SLFSPRRNSRASLFSFRGRARDFGSENDFADDEHSTFEDSDSRRGSLFVPHCIERRSSTV
SHCSLAPRIMLPANGKMHCTVDCNGVVSLVGGTSVQTSPIGRLLPEGTTTESEARKKRSG
SHQPSDYLDETVARKRALSVASILTNTMEELEESRQKCPPCWYKFANSFLIWDCCPAWLK
VKKIVNMVVMDPFVDLAITICIVLNTLFMAMEHYPMTPGFNHVLSVGNLVFTGIFTAEMC
LKVIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTL
NMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRECVCKISEDCELPRWHMDD
FFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMMVMVIGNLVVLNLFLALLLSSFS
ADNLAATDDDSEMNNLQIAVGRIQKGIAFVKSTLRQFLQSLCLAGSKPRALDEEKPLDDL
HSDGKENCLSNHVPVAIDLTKDYLKEGCISPGNGVEGHVKYGIEEGDYMSFIHNPSLTVT
VPIAVGESDFENLNTEDFSSDSSDIEGSKEKLSVDAVLSSSEGSTVDIRPPGEGVESVEL
EPEESLDPEACFTEGCVMRFQCCQVDAETGSGKSWWNLRKTCFIIVEHNWFESFIIFMIL
LSSGALAFEDIYIEQRKTIKTVLEYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDF
LIVDVSLVSLVANALGYSELSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMN
VLLVCLIFWLIFSIMGVNLFAGKYYHCVNISSDELFPISVVNNMSDCYALNANNDTARWK
NVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDLEQQPDKESNLYMYLYFVIFIIF
GSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANK
FQGLIFDFITKQAFDIVIMILICLNMVTMMVETDDQTKEMDDILYWINLVFIILFTGECV
LKMISLRHYYFTIGWNVFDFVVVILSIVGMFLSEMIEKYFVSPTLFRVIRLARIGRILRL
IKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFAMSNFAYVKREAGIDDMFNFET
FGNSMLCLFQITTSAGWDGLLAPILNKHDPDCDSQMEHPGSLYRGNCGNPSVGIFFFVSY
IIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWERFDPNATQFVEYSKLS
DFADALDPPLRIPKPNKIQLIAMDLPMVSGDRIHCLDILFAFTLRVLGEEGEMDALRGQM
EDRFMASNPSKVSYEPITTTLRRKQEEMSSVVIQRAFRRYRLRQMVKKASEAYRKQLQDG
GVRIMEKEVLVIGKFQENSASDKTDMTPSSASPPSYNSVAKSEKDKYEKERREKEDKAKD
ARDRKK
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagacttctgggaaaacctctaccagcagaccctgcgtgcagctggaaagccc
tatatgatcttctttgttcttgtgatcttcctgggctccttctatctggtaaatctcatc
ctggctgtggtggccatggcatatgacgaacagaaccaggccaccatagaagaggctcaa
cagaaagaggaggagtttcaagcaatgctagaacagctaaagagacaacaggaagaggca
caggttgccgcggcagcagcaacagagagtggggagtacagcgggagggggggcttgtca
gaggaaagctcctccggggggtccagactcagctccaagagcgctaaagagcgaaggaat
aggaggaagaaaagaaaacaaagggaagaagaagagaaagccgatcaggaaaagttccat
aagtccatctcagaggacagcatcagacggcctggatttcgattctccatcgatgccaac
cgactctcgtatgagaagaaatgttccactccaaaccagtctcttctcagcattcgtgga
tctctcttctccccaaggagaaacagtcgtgccagtctgttcagttttcgcggtagagcg
cgagatttcggctcagaaaatgattttgcggacgatgagcacagcacgtttgaggatagt
gacagtcgccgcggatcgctcttcgtacctcattgtattgagagacgaagttccactgtc
agtcattgcagccttgctcccagaattatgctcccagccaacggaaaaatgcactgcaca
gtcgattgcaatggagtggtctccctggtgggcgggacatctgtgcaaacatcaccaatc
ggacgtttgttacctgagggtacaaccactgaatctgaggcacgtaaaaaacgttcagga
tcacaccagccgtctgattatctggacgagacagtagccagaaaaagagctctgagtgtg
gccagcattctgacaaatactatggaagaacttgaggaatcacggcagaagtgccctcca
tgttggtacaagtttgccaacagcttcctgatctgggactgctgtccagcctggctgaag
gtgaagaagattgtgaacatggtggtgatggatccatttgtagacttggccataaccatt
tgcattgttctcaacaccctctttatggctatggaacactaccctatgacaccagggttc
aaccatgtgctgtcagttgggaacctggtattcacaggaatcttcacagcagagatgtgt
ctgaaggtaattgctctagacccatattactacttccaagaaggctggaatatatttgat
ggcatcatcgtgagcctgagtcttatggaactgggcctggccaatgttgagggactttct
gtgttgcggtcttttagattgttaagagtctttaagctggcaaagtcttggcccacactg
aacatgctgataaagatcattggtaactcagttggtgctttgggaaatctaaccctcgtc
cttgccatcatcgtcttcatcttcgctgtggtgggaatgcagttgtttggaaagagctac
cgtgagtgtgtctgcaagatctcggaagactgtgagttgccgcggtggcacatggatgat
ttcttccactccttcctgattgtgttccgagtgctttgcggcgaatggatcgaaaccatg
tgggactgcatggaagtggcggggcagtcaatgtgtctcatcgtcttcatgatggtcatg
gtcattgggaatctggtggtgttgaacctgttcctggccttgctgctgagctctttcagt
gccgataatctggccgccactgatgacgacagcgaaatgaacaacctgcagattgccgtg
ggcagaatacagaaaggtatcgcttttgtcaagtccactttacgccagtttctccaaagc
ctctgcctggccggctccaaacctcgtgctttagatgaagagaaaccccttgacgacctc
cacagtgacggcaaggagaattgcttgtccaatcacgttccggtggccatcgacctcact
aaagactatctgaaggagggctgtatctcccctggcaatggggtggaaggtcacgtaaag
tatgggattgaggaaggcgactacatgtcgttcatacacaatcccagcctcactgttaca
gtaccgattgcggtaggagagtcggactttgaaaatctgaacacggaagatttcagtagt
gactcgtctgacatcgagggcagtaaagagaagctgtctgttgatgcggttctcagttct
tcagaagggagcacagtggatatccgaccccctggagagggtgtggagtctgtggagctg
gagccggaagagtccctggacccagaggcctgcttcacagaaggctgtgtgatgaggttt
cagtgctgtcaggtcgatgcagagacgggaagtgggaagagttggtggaatctcaggaaa
acctgcttcattattgtagagcacaactggtttgagtcctttatcatctttatgatatta
ctcagcagtggagcactggcttttgaggacatttacatcgagcaacgtaaaacaataaag
acagtgttggaatatgcagataaagtcttcacatacatctttatattggagatgcttctg
aagtgggttgcgtacggcttcgtcaaatacttcaccaacgcctggtgttggcttgacttc
ctgattgttgatgtgtcactggtgagtctggtagcaaatgctcttggttactctgaacta
agtgccattaagtccctgagaacactgcgtgctcttagacctttgagagcattgtcacgc
tttgagggaatgagggttgtagtgaatgccctgctgggagccataccttccatcatgaat
gtgctgctggtgtgtttgatcttctggctgatcttcagcatcatgggggtgaaccttttt
gctgggaaatactaccattgtgttaatatctccagcgatgagttgttccccatcagtgtg
gtcaataacatgtcagattgctatgccctgaatgcaaacaatgacacagcacgctggaaa
aacgtgaagattaatttcgataatgtgggagccggatacctggcgctactgcaagtggcc
acatttaaaggatggatggacatcatgtacgcagctgtggattcccgtgatttggagcaa
cagcctgacaaggaatcaaacctttacatgtacctgtacttcgtcatcttcattatcttc
ggctccttctttacccttaacctcttcattggtgtcatcattgataacttcaatcagcag
aagaaaaagctagggggtcaggatatcttcatgacagaagaacagaagaaatattacaac
gccatgaagaaactgggatctaagaagcctcagaagccaattcccaggcctgcgaacaag
tttcaaggcctcatctttgactttatcaccaaacaagccttcgacattgtgattatgatc
ctgatctgcttgaacatggtgaccatgatggtggaaaccgacgatcagacaaaggagatg
gacgatattctgtactggataaacctggttttcatcatcctcttcactggagaatgtgtt
ctcaagatgatctccctgcgacactactacttcaccattggctggaatgtgtttgacttt
gtagtggtgattctgtcaattgttggcatgttcctctctgagatgatcgagaaatatttt
gtatcgccaaccttattccgagtcatcagacttgccagaatcggtcggattcttcgtctc
atcaaaggagccaaaggcattcgtacactcctgtttgccttgatgatgtcacttcctgcc
ttgttcaatattggcctcctcctgttcctggtcatgtttatttatgccatttttgcaatg
tccaactttgcctatgtgaagcgggaggcggggattgatgatatgtttaactttgagaca
ttcgggaattcaatgctttgcttgttccagattaccacttctgcaggatgggacggcctc
ctggcacccatcctgaacaagcatgatccagattgtgacagtcaaatggagcacccgggc
agtttgtaccgcggcaactgcggaaacccctctgtcggcatcttcttcttcgtgagctac
atcatcatctgcttcctgattgtggtgaacatgtacatcgccgtgatcttggagaacttc
agcgtagccacagaggagagcgctgaaccgctgagcgaggatgactttgaaatgttctac
gaagtttgggagcgattcgaccccaacgccacgcagttcgtggaatacagcaagctttcc
gactttgcggacgctctggatcctccgttacgcatccccaagccaaacaagatccagctt
atagccatggacctgcccatggtcagtggcgaccgcatccactgcctggacatcctgttt
gcctttaccctgagggtactgggagaggagggcgagatggatgccctgaggggacagatg
gaagatcgtttcatggcctccaatccctccaaagtctcgtacgagcccatcactacaacc
ctccgcaggaaacaggaggaaatgtcatctgtggtcatccagagggccttccgacggtac
cgtttaaggcaaatggtaaagaaggcctctgaagcctaccgaaaacagctacaggatggg
ggtgtgcgtatcatggagaaagaggtgcttgtcattggaaagtttcaagagaactctgca
tcggacaaaactgatatgactccctcctctgcctctccgccgtcttataacagtgtggcc
aagtcagagaaagacaaatatgaaaaagagaggagagagaaggaggacaaagcaaaagat
gcaagagacagaaaaaaatga
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