Cyprinus carpio (common carp): 109095403
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Entry
109095403 CDS
T05134
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109095403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109095403
03012 Translation factors [BR:
ccar03012
]
109095403
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109095403
Translation factors [BR:
ccar03012
]
Eukaryotic type
Release factors
109095403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
109095403
NCBI-ProteinID:
XP_042626550
UniProt:
A0A8C1RE99
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All DBs
Position
A14:9750865..9760752
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AA seq
443 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLQAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPHNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQVKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAAEILIVYENLETMRYVLKLHGAEVNGSENDEKVIYLTPEQEKDK
SHFIDKETGQEHELIECMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGLEYQEEDEEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatccgaacgcggcggacagaaacgtggagatctggaagataaagaaactc
atcaagagtctacaagcggcgagaggtaacgggaccagcatgatctcgctcatcattcct
cctaaagatcagatctccagagtggccaagatgttggcggatgagttcgggacagcatca
aacatcaagagtcgagtgaaccggctgtcagtgctgggagccattacttctgtgcagcag
agactcaaactctataacaaagtgccccataatggtctggtggtttactgcggcaccata
gtgacagacgaaggcaaagagaagaaagtcaacatcgactttgagccgttcaaacccatc
aacacctctctgtacctctgtgataacaagttccacacagaggctctgacggcgttgttg
tcagacgacagtaagtttggattcatagtcattgatggtagtggagctctgttcgggact
ctgcagggaaacaccagagaagtgctgcacaaattcactgtggacctgcccaaaaaacat
ggaagaggaggtcagtccgcgctgcgtttcgctcggttacggatggagaagagacataat
tacgtgaggaaggtggcagagacggccgtgcagctcttcgtatccaacgataaagtcaac
gtggccggactggtgctggccggatctgcagatttcaaaacggagctcagccagtcagac
atgttcgatccgaggttacaggtgaaagtgttgaagctggtcgacatctcttacggagga
gaaaacggcttcaatcaggccatcgaactgtccgctgaggtcctgtccaacgtcaaattc
atccaggagaaaaaattaatagggcgatacttcgatgagatcagtcaggacacagggaag
tattgttttggtgtggacgacacactgaaggcgctggaaatgggagccgctgaaattctc
atcgtctatgaaaacttggagacgatgagatacgtcctgaaattgcacggcgcggaggtc
aacggttcggagaacgatgagaaagtcatttatttgaccccagagcaagagaaggacaaa
tcacacttcatagacaaagagacgggtcaggagcacgagctcatcgagtgcatgccactg
ctggagtggttcgccaacagctataagaagtttggagcgactctggagatcgtgacggat
aaaagtcaagagggatcgcagttcgtcaagggtttcggaggaattggaggtattttgcgg
taccgagtggatttccaggggttggaataccaggaagaagatgaggagttttttgatttg
gatgactactag
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