Cyprinus carpio (common carp): 109096462
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Entry
109096462 CDS
T05134
Name
(RefSeq) sodium channel protein type 1 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109096462
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109096462
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
Zip
T3SS_ATPase_C
Motif
Other DBs
NCBI-GeneID:
109096462
NCBI-ProteinID:
XP_042587792
Ensembl:
ENSCCRG00000005134
UniProt:
A0A9Q9WQM5
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All DBs
Position
B9:complement(29568081..29618393)
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AA seq
1960 aa
AA seq
DB search
MAHSFTPPGPKSFHKFTRESLKAIESRIAEENARKSKDKQERNKDDESRRKPNSGLEAGK
NLPFIYGDVPRGLVSTPLEDLDQFYSNQRTFIVVNKKKTISRFNAAPALYIFSPFNLLRR
ISVKILVHSLFSMFIMFTILANCAFMVYSQPPDWAKNVEYAFTGIYTFEALIKIIARGFC
VGQFTFLRDPWNWLDFMVIVMAYVTEFVDLGSVSALRAFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTLFCLSVFALVGLQLFMGALKQKCVLQPSDYNLTFYYLLNNTEKCY
ENYDCKTYINNQSNHYIQSGKKDAMICGKSSDAGQCPENYVCIKAGLNPDYGYTSFDSFG
WAFLALFRLMTQDYWENLYQQTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYDEQ
NQATIDEALKKEEEFSAMLQQRREEDAQAAAEASKCDGLSGEKTDSSSDASKLSSKSAKE
RRNRRKKRQRQGEGEKEEDSNREGIDRKASFRLTADGKIRLSRERTYTSPHQSPLSFQGS
ILTPRRDSKGSVFSFRGRVHSENNYADDEQSMYEETGSRRNSLFVPSRSDPLYNTLSKSS
LTPRILLPSNGKARYVVDSNGMVIVSGGVSSPNSPSGLLTPEVSRKRATFDDTCFDTDEE
YRRRCDSKTKSFLYDQSVRQRGLSVASSSNNTTDLSEVWKQKCVEYWFEFAESYLIWDCS
PTWLKIKKIVHMVMMDPFADLFITICIVINTAFMAMEYHPMNTAYVNMLITANVVFIAIF
TAEMIFKIIALDPYNYFQEGWNIFDSIIVTLSLLELCLPGIGFLRPFRLLRVFKLAKSWP
TLNMLIKIIGNSLGALSNLTLVLAIIVFIFAVVGMQLFGKNYRDCVCKISEDCTLPRWHM
NDFFHSFLIVFRVLCGEWIETMWDCMQVAGQTLCLIVYMMVMVIGNLVVLNLFLALLLSS
FSADNLAAPGEDVEKNNLQIAVGRIKKGFAVVKACLQNFFRSGCIRKRKPKKKTVDGNII
LRNCKKINNSNHTSLELVKGSGGTDMDSDMEDFISNPSLTVSVPIAVEESDFECLNTEDF
SSLSSDLEDKEKLSDVAPSSSEGSTVDLRHFGKDGEDALDSELEESTDPEACFTTGCVQK
FPCCQVDAEKGMWKKWWLLRQTCYNIVEHSWFESFIIFMILLSSGALAFEDIYLESRKTV
KTILEFADKVFTYIFILEMLLKWVAYGFAKYFTNLWCWLDFIIVDVSLISLVANALDYSE
LGAIKSLRTLRAFRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIVGVNY
FAGKFYECVNKTSGKRMSTEFIRNKTDCLGSPNELDWRNLKINFDNVGNGYLALLQVATF
KGWMPIMYAAVDSRNVKDQPEYEVNLYMYLYFVIFIILGAFFTLNLFIGVIIDNFNQQKK
KFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPKNKIQGFIFDLITQQAFDIFIMVLI
CLNMVTMMVETDDQSKQTTNVLYWINVGFIVLFTSECVLKMAALRQYFFTVGWNVFDFIV
VILSIVGMFLAEVIKKYFFSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALF
NIGLLLFLVMFIYAIFGMSNFAYIKKSGGIDDMFNFETFGNSMLCLFQITTSAGWDGLLA
PMLITNESECNPNKTFPGSQVKGDCGNPPIGIFFFVSYIIICFLIVVNMYIAVILENFSV
ATEESAEPLSEDDFNRFYEVWEKFDPKATQFMDYDKLSDFANSLDPPLRIPKPNRLQLIS
MDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILRGQMEDRFMASNPSKSSYEPITTTLR
RKHEEMSAAIIQRAYRSHIIRHSIKKVRNVYRETKQQNGMVPSKESVDNENCDNHSASEN
SDATPATSSPLSYDSLMQNATNKYKKDKHEKEVEDKGNGV
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggcgcattcgtttactccaccaggacctaaaagtttccataagttcacccgtgaatct
cttaaggccatcgagagccggatcgctgaggagaatgccaggaagtccaaggacaagcag
gagagaaataaagacgatgaatccagaagaaaacccaacagcggcctggaggccgggaaa
aatctgcccttcatatacggagacgttcccagaggactggtgtccacaccactggaggac
ctggaccagttctacagcaatcagagaacttttatagtagtgaacaaaaaaaagacaatc
agccgtttcaacgctgctcctgccttgtacatcttcagtcccttcaaccttttgagaaga
atttcagttaagattttggtgcattcattgttcagtatgtttataatgttcactatactg
gcaaactgcgctttcatggtctactcacaacctccagattgggccaagaatgtagagtat
gccttcactgggatatacacttttgaagcacttataaagatcatcgctaggggattctgt
gtgggacagtttacgtttctcagagacccatggaactggttggattttatggttatagtc
atggcatatgtaacagagtttgtggatctgggtagtgtgtctgcgctgcgagcgttcaga
gttcttcgagccctgaaaactatatcggtcatcccagggctgaaaacaattgttggagct
ctgatccagtcagtgaagaagctgtcagatgtgatgatcttaacccttttttgcctaagc
gtctttgctttggtcggactgcagcttttcatgggagctctaaaacagaaatgtgtgctc
cagccatccgattacaacttaaccttttattatttacttaacaatacagagaaatgttac
gaaaattacgactgcaagacatacattaacaatcagagtaatcattatattcaatcagga
aagaaagatgctatgatctgtgggaaaagcagtgatgctgggcagtgtccagaaaattat
gtctgtataaaagcaggtctcaatccagattatggttacacaagctttgattcctttggc
tgggccttccttgcattattcagactgatgactcaagactactgggagaatctttaccaa
cagactcttcgggccgcaggaaaaacctacatgatttttttcgtgctggtcattttcttg
ggatccttctacctggtgaatctgatcctggctgtggttgccatggcatatgatgaacaa
aatcaagccactattgatgaggctttgaagaaagaggaggagtttagtgccatgctccag
cagagacgtgaagaggatgctcaggccgcggctgaagcgtccaagtgtgatgggctgagc
ggagaaaagacagactcttcctcggacgcctccaaactcagttccaaaagtgccaaagaa
agacgcaaccgaaggaaaaagagacagcgtcagggggaaggcgagaaagaggaggattcc
aacagggagggaattgatagaaaggccagcttccgtttgacagctgatggaaaaatccgg
ctctcacgtgaaagaacttacacgtctccacatcagtcccccctgagttttcagggctca
atcctcactccacgtcgggacagcaaaggtagcgtcttcagcttccgcgggcgtgtgcat
tcagaaaacaactacgccgatgacgagcaaagcatgtatgaggagacgggcagcaggaga
aactctttgtttgtaccctctcgatctgatccgctttacaacactcttagcaaaagtagc
ctgactccacgtatactgttgccctctaacggaaaagcacggtacgtggtcgacagcaat
ggcatggtgattgtgtcaggtggagtgtcttcacccaactcgccctccggattactgacg
ccggaggtgtccagaaaaagagctacatttgacgacacttgctttgacacagatgaagaa
tatcgacgccggtgtgattcaaagaccaagtcttttctatatgaccaatcagtgagacag
cgaggtttgagtgtagcaagtagcagcaacaacactactgacctgtcggaggtctggaaa
cagaaatgtgtggagtactggttcgagtttgcagagagttatctgatctgggattgcagt
cccacgtggctgaagataaagaaaattgtccacatggttatgatggacccctttgcagat
ctgttcatcaccatttgcatcgtgataaacactgcattcatggccatggagtatcacccc
atgaataccgcctatgttaacatgcttataaccgccaatgtggttttcatagccatcttt
acagcagaaatgatattcaagatcattgcgttggacccatacaattactttcaggaaggc
tggaatatctttgacagcatcatagttacgctgagtctcctggaactttgtttgcctgga
atcggttttcttaggccattcagactgctaagagtcttcaaactagctaagtcctggccg
actctgaacatgctgatcaagatcattggtaactcgcttggtgccttgagcaacctgacg
cttgtgctggccatcatcgtcttcatcttcgccgtggtgggcatgcaactgttcgggaag
aactacagagactgtgtatgtaagatttctgaggattgcacgcttcctcgctggcacatg
aacgatttcttccactcgttcctgatcgtcttcagggttctgtgtggagagtggatcgag
accatgtgggactgcatgcaagtggcaggacagaccttgtgcttgattgtgtacatgatg
gtcatggtgattggaaatctggtggttttgaacctgttcctcgctctgctgctgagctca
ttcagtgccgacaacctcgcggcccccggagaagatgttgaaaagaacaacctgcagata
gcggttggtcgaatcaagaaaggttttgccgtagttaaggcctgccttcagaatttcttc
cggagcggctgtataagaaagcggaagccgaaaaagaaaaccgtagatgggaacatcatt
ttgagaaactgcaagaaaataaataactccaaccacacctcactagagctggttaaaggc
agcgggggtacggacatggatagtgacatggaggattttatcagcaacccaagcttgacc
gtcagtgtcccgatcgctgtcgaggagtcagactttgagtgcctcaacactgaggatttc
agcagcctttcttcagacctagaagataaagagaagctgtctgacgtggctcccagctct
tcagagggcagcacggtggacctcagacacttcggtaaagatggagaagatgctttggac
tctgaacttgaggaatctacggatccagaagcctgtttcacaacagggtgtgtccaaaag
ttcccgtgctgccaggtggatgctgaaaagggcatgtggaagaaatggtggctgctgaga
cagacctgctataatatagtggagcacagctggtttgagagcttcatcatcttcatgatt
ctgcttagcagtggcgctctggcttttgaggacatttaccttgaatcgaggaaaaccgta
aagaccatactggaatttgctgataaagttttcacctacatcttcattctcgagatgctg
ctgaaatgggtcgcgtatggttttgccaaatacttcaccaatctctggtgctggctggat
tttattattgttgatgtctctctgatcagcctggtggccaacgccctggactattcagag
ctgggcgccatcaaatctctccgaaccctgagagccttccgaccgctccgagctctctca
cgctttgagggaatgagggtggttgtgaatgctcttctgggcgccatcccctccatcatg
aacgtcctgctggtctgcctcatcttctggctcatttttagcattgtgggcgtcaactac
ttcgccgggaagttttacgaatgtgtaaacaaaacctcgggaaagcgcatgtctaccgaa
tttatccgtaataaaacggattgtctcggaagccccaatgaacttgactggagaaatctg
aagattaactttgacaatgtaggaaatggatacctggccctgctacaagtggccactttt
aaagggtggatgcccattatgtatgcagcggtagactctcgcaatgtaaaggatcaacca
gagtatgaggtgaatctgtatatgtacctctattttgtcatcttcatcatccttggagct
tttttcacattaaatctcttcattggcgtcatcattgacaacttcaatcagcagaagaaa
aagtttgggggtcaggacattttcatgacagaagagcagaagaaatactacaacgctatg
aagaagctaggctcaaagaaacctcagaaacccattccaaggccaaaaaacaagattcaa
ggattcatctttgacctcataacccaacaggcctttgacattttcattatggtccttatc
tgtctcaatatggtcactatgatggtggagacggacgatcaatccaagcaaacgaccaac
gtgctgtactggatcaatgttggtttcattgtgctcttcaccagcgaatgtgtgctaaag
atggccgcgctacggcagtacttcttcaccgtcggctggaatgtattcgactttatcgtg
gtcatcctgtctatagttggcatgttcctggcagaagtcattaagaagtactttttctca
cccaccttgtttcgcgtcattcgcctcgcccggattggccgcgtgctacgtcttatccga
ggcgctaagggaatacgaacccttctgtttgcgttgatgatgtcacttcctgcccttttc
aacatcggacttcttctcttccttgtcatgttcatctatgccatcttcggcatgtccaac
ttcgcctacatcaaaaaatcgggcggcatcgacgacatgttcaacttcgagacgtttggc
aacagcatgttgtgtttatttcagatcaccacctcggcaggctgggacggccttctggcg
cccatgttaattaccaatgaatccgaatgcaacccgaataaaaccttccccggcagccag
gttaaaggcgactgcgggaacccgcccatcggtattttcttcttcgtcagctacatcatc
atatgcttcctgatcgtggtgaacatgtacatcgccgtcatcctggagaacttcagcgtg
gccaccgaggagagtgccgagcctttgagcgaagatgacttcaataggttttacgaagtt
tgggagaagtttgacccgaaagccacgcagttcatggattacgacaagttgtcagacttc
gccaattctctggatccgcctctgcgaatccccaagcccaaccgactgcagctcatctcc
atggatctgccgatggtgagcggcgaacgcatccactgcctggatatcttgttcgctttc
accaaacgtgttctcggggaaggcggtgagatggacatccttcgcggacaaatggaagac
cgattcatggcctccaacccctcaaagtcctcttatgagcccatcaccacaaccctgcgc
aggaagcatgaagagatgtctgctgcaatcatccagagagcctataggagccacatcatc
cgacatagtataaagaaggtccgtaatgtgtacagagagaccaagcagcaaaacgggatg
gtcccgagtaaagagtctgttgacaatgaaaactgcgataatcacagcgcttcggaaaac
tctgatgcaacgcccgccacgtcctctccgctgtcgtatgatagcctgatgcagaacgcc
acaaacaaatacaagaaggacaaacatgagaaggaagtggaagacaaaggaaacggcgtt
tag
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