KEGG   Cyprinus carpio (common carp): 109096478
Entry
109096478         CDS       T05134                                 
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1-like
  KO
K12647  interferon-induced helicase C domain-containing protein 1 [EC:3.6.4.13]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04622  RIG-I-like receptor signaling pathway
ccar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    109096478
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109096478
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ccar04054]
    109096478
Enzymes [BR:ccar01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     109096478
Pattern recognition receptors [BR:ccar04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   109096478
SSDB
Motif
Pfam: RIG-I_C-RD CARD_2 RIG-I_C ResIII DEAD SWI2_SNF2 SNF2-rel_dom CARD DUF3638 DUF3456 AAA_22 AAA_19
Other DBs
NCBI-GeneID: 109096478
NCBI-ProteinID: XP_018965626
LinkDB
Position
18:complement(20516042..20560141)
AA seq 1082 aa
MSCDKDAETRHTLDCFRDRLKRLIQVEPLLDLLHFLEPDRKDRIKAKFREEGNISAATLL
IDEIIHSKNCEQGWSRELVTALETVGCKHAAKYVLNSPPEPTEEAENDSCVRLIDLLQLT
LVNMKTADVCAHCRVMGLLTQEDQENILKLIENQGNIGGARLLLKRLVKNEAGWFSKFLQ
ALEDTEHHELVRELRGEPCNEDEAMSVETVEEGEQSCSSATVETNMYSSMSLPPPVLSAN
SSLLSEDLDSSVDSSGLGACADNEEVDMYKEGEEEDLTEDDNPSEEDKRDIVLRDYQMEV
ARPALEEKNIIICLPTGSGKTRVAVYITKEHLEKRKQMGQPGKVVVLVNKVPLVEQHYKA
EFGRFLKHQYSVERVSGASQLKISFPQIIEQNDIIICTAQILENSLAKAKNGDEDGIKLS
QFTLMVIDECHHTKKGGVYNHIMIRYLKQKHQNQLLKKQDKSPVPLPQILGLTASPGVGG
AMSQQRAEEHILQICANLDAFTIKTKTFEEEEAKTPFKRIARAEERKEDPFGDVIKKIMD
EIHEHADLKPLCEPGIQNYEQWVVQKEQNAAKEENQKVRVCAEHLRQYNEALHQSNTIRM
SDAFRFLDKYHNEELKTKSIADEEGTVTITDTERFLFTLFKDNKAKLQELMGKPQYENNS
LAQLKTSILKEFSTRERARGIIFTRTRLSAIALCQWIQENPKFDEVGVSAPAVVEEEQRT
VSYTRGGGGEESKLITVRENASLQERLLDYETNGVIACKNCGQQWGSMMLYKSIECPCLH
IKNFVVTYGSKKKTFSKWSELPIKFPAFDYTQHADLLGCNKVCVALVGALVVITLIAIPT
AIYYHAEVSVINMNDVRRAVFPSLQARGRGRAEDSSYTLVAEAGSGVAERESVNEYREKM
MSKAIAKVCKMNRADYEKKIREFQMQAIMEEKVKIKKKQQKGMMKEPPSKISLSCRQCSV
FVCSGEDIEKIENMHHVNVTTQFSKLITVRENASLQERLLDYETNGVIACKNCGQQWGSM
MLYKSIECPCLHIKNFVVTYGSKKKTFSKWSELPIKFPAFDYTQHADLLVEDSGEEEDME
TD
NT seq 3249 nt   +upstreamnt  +downstreamnt
atgagctgcgataaggacgcagagacgcgtcacactctggactgtttcagagacagactg
aagcgactcattcaggtcgagccacttctggatctgttgcatttcctcgaaccggatcga
aaggaccggattaaagccaagtttcgtgaggaggggaacataagcgccgcgacacttctg
attgacgagattattcactctaaaaactgcgagcagggatggtcgagagagctggtcacc
gcgctggagaccgtcgggtgcaaacacgccgcgaagtacgtgttgaacagcccaccggag
cccacagaggaggcagagaacgacagctgcgtccggctgatcgacctcctgcagctcacg
ctggtcaacatgaagaccgcagacgtgtgcgcgcactgccgcgtgatggggctcctgacg
caggaggaccaggagaatattctgaaactcatagagaatcaagggaacataggtggcgct
cggctgctcctcaaaaggctggtgaaaaatgaagctggctggttttccaaattccttcag
gctctggaggacacggagcaccacgagctggtgcgcgagctgcggggagagccgtgtaat
gaggacgaggccatgtcagtcgagactgttgaggagggtgaacagtcatgctcatctgcc
acagtggagactaacatgtacagctctatgtcacttccccctcccgttctctcagcgaat
agctcgcttctgtcagaggatctggacagcagtgtggacagcagcggtctgggtgcatgt
gctgacaatgaagaggtcgacatgtacaaagaaggtgaggaggaagatctcacagaggat
gataatccatcagaggaagacaagagagatattgtactgcgtgactatcagatggaggtg
gcgagaccagctctggaggaaaagaacatcatcatctgcctccctacaggaagcgggaaa
accagagttgctgtgtatatcactaaggaacatttggagaagaggaagcagatgggacaa
ccggggaaagttgttgttttggtcaacaaggttcccctggtcgagcagcactacaaggcc
gagtttgggcggtttctgaagcaccagtactcagtggagcgggtcagtggagcctcgcag
ctcaaaatctccttcccacaaatcatcgagcaaaatgacatcatcatctgcacagcacag
attctggaaaactctttggccaaagccaagaacggcgacgaggacgggatcaaattatca
cagttcactctgatggttattgatgaatgccatcacacgaagaagggcggtgtgtataac
cacattatgattcgctacctgaaacaaaaacatcagaaccagctcctgaagaagcaggac
aagagtcccgttccgctccctcagattctgggtctgacggcctcacctggtgtgggagga
gccatgagccagcagagagcggaggaacacattctccagatctgcgcaaacttggatgcc
tttactataaaaacaaagacttttgaagaagaggaggccaaaacaccattcaaaaggatt
gcaagagcagaagagaggaaggaggacccgtttggagatgtgatcaagaagataatggat
gaaatccacgagcatgctgacctgaagcccctctgtgagcccggtatacaaaattacgaa
cagtgggttgtacagaaagagcagaacgctgctaaggaggagaatcagaaggtgcgcgtg
tgcgccgaacatctccgccaatacaacgaggctcttcatcagagcaacaccatacgcatg
tcagacgccttccgcttcctcgacaaatatcacaacgaagagctcaagaccaaatccatc
gccgatgaggaaggcactgttacaatcacagacacagagcgattcctcttcactttgttc
aaagacaataaagcaaagctgcaggagttgatgggaaagccgcagtatgaaaacaacagt
ctggcccagctgaaaaccagcatcctgaaggaattcagcaccagagagagagcgagaggc
atcatattcacccggacccgcctcagcgccatcgctctctgccagtggattcaagaaaac
cccaagtttgatgaagtgggagtcagtgccccggccgtggtcgaggaagagcagaggaca
gttagttacacgcgtggtggcggaggcgaggagtctaagctgattacagtccgagagaat
gcttcactacaggagagactcctggactatgagaccaatggagtcattgcgtgcaaaaac
tgtggacagcagtggggctcaatgatgctgtataagagcattgagtgtccctgcctccat
atcaagaactttgtggtcacgtacggctccaaaaagaagacattcagcaaatggagcgag
ttgcccataaagttccctgcgtttgattacactcaacacgctgatctccttggctgtaac
aaggtgtgcgtggcgctggtcggggcgcttgtcgtcatcacgctcatcgctattcccacg
gcaatttactatcatgctgaagtatctgtgatcaacatgaatgatgtaagaagagctgtt
tttccctctctgcaggcccgtggtcgaggaagagcagaggacagtagttacacgctggtg
gcggaggcaggatctggggtggcagagagagagagcgttaacgaataccgggagaaaatg
atgagcaaagccatcgccaaagtgtgcaagatgaatcgagccgactacgagaagaaaatc
agagagtttcagatgcaggccataatggaggagaaggtgaagataaagaagaaacagcag
aaaggaatgatgaaggaaccgccatctaaaatcagcctgagctgcagacagtgcagtgtg
tttgtgtgctctggagaagacattgagaagatcgagaacatgcaccatgtcaatgtcact
acgcaatttagtaagctgattacagtccgagagaatgcttcactacaggagagactcctg
gactatgagaccaatggagtcattgcgtgcaaaaactgtggacagcagtggggctcaatg
atgctgtataagagcattgagtgtccctgcctccatatcaagaactttgtggtcacgtac
ggctccaaaaagaagacattcagcaaatggagcgagttgcccataaagttccctgcgttt
gattacactcaacacgctgatctccttgtagaggactcgggggaagaagaagacatggaa
actgactaa

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