Cyprinus carpio (common carp): 109099154
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Entry
109099154 CDS
T05134
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar02010
ABC transporters
ccar04145
Phagosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109099154
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109099154
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109099154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccar02000
]
109099154
Enzymes [BR:
ccar01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
109099154
Transporters [BR:
ccar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
109099154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_15
ABC_ATPase
AAA_30
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
109099154
NCBI-ProteinID:
XP_042623645
UniProt:
A0A8C1N8T4
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All DBs
Position
A12:complement(14184789..14190763)
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AA seq
733 aa
AA seq
DB search
MQREKLMMTSEAHPIYRTVAVHFCLLCCDLGIWACVWTALLWLDGEGSLDLWGLWALRAI
SCVVLYSLSTIFADGSVQLLLKRWVVLLSFLPPVFDSMQTMLHGTMRGFTPVPDPGMVIL
SLATSTLIYMVWEMAFPHGGPSKGTRNQKKDEEAKALLMRVIRYSKPDYLHLGAAFLFLS
LAALFETFIPYCIGKVVDILSGKYQHTNFSWAIGLMALCSLGSSMFSGMRGGMFMCSLSR
LNKRIRHMLFQNLMKQEISFFEENKPGSLTSRLTSDTDKMGRSVAMNVNVLLRSLVKTCG
MLFFMLRLSWQLTLLTCIEMPLLAFIQNSYNNISQKIAIELQDCNAETTELASSVIGSMK
TVRSFKAEHQEQQRYEQTLNRKLQVLRCKGIYSAIHLLIRRFITVGLKVAMLIQGRNLIS
SRQLSSGSLLSFVFYQKDMVTNMRHLVYIYGDMLNTVGSAVKVFQLLDRKPQMREAGDLA
PEKVEGRLTFEKVTFSYHSRPNEKALKSVTLELSPGKLTALVGPSGGGKTSCVCLLQRFY
EPQEGELLLDGEPLYQYQHQYLHKKVAMVSQDPVLFSGSARYNIEYGLKDCTLERVKEAA
RKANAHNFISKLEQGYDTDVGECGGQLSAGQKQCIAIARALIRNPQILILDEATSHMDCS
TQQAVQDVLNNIKDQTVLVIAHRLETVEKADHIIFMEGGEVVEQGTHQQLMAKEGRYYRL
REKLFNLETQPAD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgagaagctaatgatgacctcagaggctcaccccatctatagaaccgtagca
gtgcatttctgcctgttgtgctgtgatcttggcatctgggcttgtgtgtggacggccctg
ctgtggttggatggagagggcagtctggatctatggggcctgtgggctctcagggccatc
agctgtgttgtgctttattcattgagcacaatttttgctgacggaagcgttcagcttctc
ctgaagcgctgggttgtcctactgagcttcctacctccagtgtttgacagtatgcagaca
atgctgcacggtaccatgagaggcttcactcctgttcctgatcctggcatggtgatcctg
agcttagctacatctaccctcatatatatggtgtgggagatggccttcccacatggtgga
ccatctaagggtaccagaaaccagaagaaagatgaagaggccaaagcactcctaatgagg
gtcattcgatactccaagcctgactatcttcatctaggggctgcgttcctcttcctcagc
ctggcagcactgtttgagacattcatcccatactgcattggcaaagttgttgacatattg
agtggaaagtaccagcacaccaatttctcatgggctattggactcatggcactgtgctca
cttggaagttctatgttcagtggtatgcgcggcgggatgttcatgtgtagcctcagcaga
ctcaacaaaagaatacgacacatgctgttccagaacctcatgaagcaggagataagcttc
tttgaagaaaacaaaccaggtagtctcacgtcacgcttgacctctgacactgataaaatg
ggtcgttctgtggccatgaatgtgaatgtgttactgcggagtttggtgaagacatgtggc
atgttgttctttatgctgcgcctatcctggcagttaaccctcctcacctgcatcgaaatg
ccacttcttgctttcattcaaaattcatacaacaacatctcccagaaaatagctatagag
cttcaggactgtaatgcagagactacagagttggcatcttctgtcattgggtcgatgaag
actgtgcgcagttttaaggcagaacatcaggagcagcagcgatatgaacagactctgaac
cggaagctccaggttctgaggtgtaaaggcatatacagtgccatccatctcttaatacgc
aggttcattacagtaggcttgaaggtagcaatgctgatccaaggccgaaatctcatctcc
tctagacagcttagcagcggcagcctcctttcatttgtgttctatcagaaggacatggtg
accaacatgaggcatcttgtatatatctacggagacatgctgaatactgtgggatcagca
gtgaaggtgttccagctgcttgacaggaagccacagatgagagaggcaggtgatttggcc
ccagagaaggttgagggaagactaacctttgaaaaggtcaccttttcctaccactcacgc
cctaacgaaaaagcacttaagtctgttacattggaattgagtccagggaagctgacggca
ttggtaggaccctctggtggtgggaagacctcttgtgtctgcttgctgcagaggttctat
gagccacaggagggtgagctgttactggatggagaacctctgtaccagtaccagcaccag
tacttgcataaaaaggtggcaatggtatcccaggatcctgtgcttttctctggctctgcg
agatataatattgaatacggtttaaaggactgcacacttgaaagagtaaaagaagctgct
cggaaagccaatgcacacaactttataagcaaactggaacaaggatatgacacagatgtt
ggcgagtgtggtggccagctgtccgcagggcagaaacaatgcattgctatagccagagct
ctgataaggaacccacagattctcatcttggacgaggccaccagccacatggactgcagc
acacaacaagctgttcaagatgtgctcaataacataaaggatcagacagtactggtgata
gctcatcgtttggagactgtagagaaagcggaccacattatcttcatggagggaggtgaa
gtcgtggagcagggaacacaccagcagctcatggccaaagaaggaagatactatcggctc
agagaaaagctttttaatctggagacacaaccagcggactaa
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