Cyprinus carpio (common carp): 109100116
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Entry
109100116 CDS
T05134
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109100116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109100116
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109100116
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
109100116
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109100116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
MarR_2
AbiEi_4
CDK5RAP3
MarR
Sigma70_r1_1
TrmB
DUF4896
Motif
Other DBs
NCBI-GeneID:
109100116
NCBI-ProteinID:
XP_018969161
UniProt:
A0A8C2K1Y2
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Position
24:5998230..6001594
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AA seq
258 aa
AA seq
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MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIAQMSKQLETFKTHLEEFASKHKQEIRK
NSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHHRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIRDSLKWERERASHVLDHLLKEGLAWLDSQAAGEPQYWLPALF
SELLSRDVTPEEANQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaagaggagtcggagctggagcgatcgccaaaaagaaacttgcagaggcaaag
tataaagagagaggaactgtccttgctgaggatcaaattgcacagatgtcaaaacaactg
gaaacctttaagacccatttggaagagtttgccagcaaacacaaacaagaaatccgtaag
aactctcagttcagggtgcagttccaagagatgtgtgccaccataggcgtcgatccactg
gcatctggaaaaggattttggtcagagatgcttggagttggagatttctactatgagctt
ggagtacagatcattgaagtctgtttagctctaaaacacagaaatggcggtctcatcaca
ctggatgaacttcaccaccgtgtcttgaaaggaagagggaagtttgcacaagatgtgagc
caggatgacttggtgcgggccatcaagaagctcaaggctatgggaaatggcttcgggatg
attcccgttggaggctcttatctagtccagtcagtcccagcagagctcaacatggatcac
actgttgtccttcagctagcagagaaaaagggctatgtgacagtgagcgagatcagagac
agcctcaagtgggaaagagagcgggccagtcacgttcttgatcacctgctgaaagaaggc
ttagcatggctggactcccaagctgcgggggagccacagtactggcttcctgctctgttc
tcggagctgttatctcgagacgttacgcctgaggaggccaaccaaatgacaccttga
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