Cyprinus carpio (common carp): 109101949
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Entry
109101949 CDS
T05134
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04210
Apoptosis
ccar04218
Cellular senescence
ccar04620
Toll-like receptor signaling pathway
ccar04621
NOD-like receptor signaling pathway
ccar04622
RIG-I-like receptor signaling pathway
ccar04623
Cytosolic DNA-sensing pathway
ccar04625
C-type lectin receptor signaling pathway
ccar04920
Adipocytokine signaling pathway
ccar05132
Salmonella infection
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109101949
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109101949
04218 Cellular senescence
109101949
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109101949
04621 NOD-like receptor signaling pathway
109101949
04622 RIG-I-like receptor signaling pathway
109101949
04623 Cytosolic DNA-sensing pathway
109101949
04625 C-type lectin receptor signaling pathway
109101949
09152 Endocrine system
04920 Adipocytokine signaling pathway
109101949
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109101949
09171 Infectious disease: bacterial
05132 Salmonella infection
109101949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109101949
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109101949
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
109101949
NCBI-ProteinID:
XP_018970838
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All DBs
Position
27:10554251..10576518
Genome browser
AA seq
876 aa
AA seq
DB search
MTMDQTQFPGIHNNNLMRTVDGPYLRIVEQPKQRGFRFRYGCEGPSHGGLPGATSEKNRK
SYPQVKICNYQGAARVVVQLVTNTVKPHLHAHSLVGKQCDKGICIADLQPKDSSISFPNL
GILHVTKKNVSKVLEERMIEAYRMGYNYGISIHPEIDVLQGEVRVPRELTDAERNLISSA
SIHQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVISDPIFDSKAPNASNLKIVRMDRTA
GCVTGGEEVYLLCDKVQKDDIQVRFYEDDESGLTWEAYGDFSPTDVHRQFAIVFKTPKYR
DQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQIIGIMFNQLYKALIVTVKASFSVFLHL
IAYQEPVEDSDEDSDSDSDDDPTAGGAVRICAQPEPVGLGVASEDTDPTEDLELNTTGCV
LEPHLAELAGRQAQALFHFAVSGDARMLLAPQRPLMTTQDENGDTGLHLGVIHSQTDAVR
NLAQVISALPGEDVLNMRNDLYQTPLHLAVLTQQKEAVEALLEAEVDVTLTDRHGNTALH
LAAQQKEDSVLRLLLKHKSVAQLTSIPNTAGLCPLHLAVQANSLSCVRALLDAGADVEVQ
ELTCGRTALHLATELGNLSLAGCLLLEGNAYVDSVTYNGSTPLHTAAGRDSTKLCAILMA
AGADPHKENFEPLFFKDDELCGTCEEEEEEDEGYIPGTTPLNMATSPEVYDILNGEEYQP
TTIVVPPQGDMKSLSSDTKQELCQALEDQTGGWESLAHALGLGILTSAFRLSSCPAGKLL
DSYEVSGGTVRELVEGLKHVGNSSAVSLLQAVCKEPEAVHTTPQLTGPVLCKSIRGFNTW
ALIRRRVGYATAEWRPLSRAPASVLQTPSTISQTKA
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggaccagacacagtttccgggcatccacaacaataatcttatgaggacagtc
gatggtccttatctacgaatcgtcgaacaaccaaaacagaggggctttaggttccgctat
ggatgtgaaggcccctcccatggaggactcccaggggccacaagcgagaagaacaggaag
tcttacccacaagtgaagatctgtaactaccagggtgcagcgcgagtggtagttcagctg
gtgaccaacactgtaaagccccatcttcatgctcacagcctggtgggcaaacagtgcgat
aaaggaatctgcattgccgacttgcagcccaaagattcaagcatcagttttcctaacttg
ggcattttgcatgtgacgaagaagaacgtaagcaaagttttggaagagaggatgatcgag
gcctacaggatggggtataactacggtatatctatccatcctgagatagatgtcctacaa
ggagaggttcgcgtgcccagagaactcacagatgctgagaggaacctgattagcagtgca
tctattcatcagtcgaaggagatggatttgagcgtagtacggctcatgttcacagccttc
ctgcccgacagtgatggagggttctcccgccgactggaaccggtcatttcagaccccatc
tttgacagcaaggccccaaatgcctccaatctgaagatagtgcggatggatcggactgct
ggctgtgtgacgggaggagaggaggtctatctgttgtgtgacaaagtccagaaagatgat
atccaggtgcggttttatgaagacgatgagtcaggtctaacctgggaggcctacggggat
ttctcccccactgacgtccacagacagtttgccatcgtcttcaagacgcctaaatatcgg
gaccagaacctccagaagcccatttctgtgtttgtgcagctaaaaagaaagtcagacaat
gaaacgagcgaacccaagcctttcacctaccatccacagattataggtataatgtttaac
caactctataaagctttgattgttactgtcaaagccagtttctcagttttccttcatctt
atagcgtatcaagaaccagtggaagacagtgatgaggacagtgacagtgatagtgatgat
gatccgacagcaggtggggctgtgcgaatctgtgcccagcctgaacctgtcggtttggga
gtggcaagtgaggacacagatcctacagaagatctggagttaaacaccacaggctgtgtg
ttagagcctcatttggctgagcttgctggaagacaggctcaagctctgtttcatttcgca
gtaagcggtgatgctagaatgcttctggctccacagcgccccctcatgaccactcaagac
gagaatggagacacgggtttacatctgggagtgatccatagtcagacagatgccgtgcga
aatctagcacaagtcatctcggctctccccggagaggatgtacttaacatgaggaatgat
ctttaccagactcctttgcacctagcagtgttgacgcagcaaaaagaggcagtcgaggcc
ttgttggaggccgaggtggatgtcacgcttacagatcgccatggaaacacggcacttcac
ctggcggctcagcagaaagaggatagcgtgctgcgattgctgctgaagcacaaatcagtg
gcgcaattaaccagcatccccaacacagcaggtctctgtccgcttcacctggctgtacag
gcaaacagtttgagttgtgtgcgggccctgctggatgctggggcggatgtagaagtccag
gagctcacatgtggccgcaccgcacttcacctggccacagaactgggaaacctttccctc
gccgggtgcctgttgctggagggtaatgcatatgtagacagtgtcacctataacggttca
actcctctgcacactgctgcaggacgggactcaaccaaactgtgtgcgatcctgatggct
gcaggagcagatcctcataaagaaaactttgaaccactgttcttcaaagatgatgagtta
tgtggtacatgtgaagaggaagaggaggaagatgaaggctatattcctgggacaacccct
ctgaacatggcaacctccccagaggtttatgatattcttaatggagaagagtatcaaccc
accaccattgtcgttccaccacaaggtgacatgaagagcttgagctctgacacaaagcag
gagttgtgccaggcactggaagatcagacgggaggctgggagagtcttgctcacgctctg
gggcttggcatcctgaccagcgccttcagactcagctcctgccctgctggaaagctgctg
gacagctatgaggtgtccggaggaacagtgcgtgagctggtggagggactgaagcatgtt
gggaacagcagtgctgtcagtttactccaggcggtgtgtaaggagcctgaagctgtccac
accacgcctcagctcacaggtccagtgctctgtaagtccattcgagggtttaacacgtgg
gctctcatcaggaggagagtgggatatgcgacagcggagtggagacctctttctagagcc
ccagcctcagtcttgcagactccaagcacaatctcacaaactaaggcctga
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