Cyprinus carpio (common carp): 109102890
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Entry
109102890 CDS
T05134
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109102890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109102890
Enzymes [BR:
ccar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109102890
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109102890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
BUD22
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109102890
NCBI-ProteinID:
XP_042625626
Ensembl:
ENSCCRG00000019390
UniProt:
A0A9R0B9N5
LinkDB
All DBs
Position
A14:complement(1989364..2012887)
Genome browser
AA seq
1698 aa
AA seq
DB search
MLFSKETPWRRLEGMSFGLFSADEIRKLSVKSITNSQLLDNVGNAAANGLYDLALGPADN
KEICSTCMQDFTSCPGHFGHVDLPLPVYNPMFFDKLYLLIRGSCLGCHMLKCPRTAVHLL
LGQLKLLDVGAMTEVYELENVLNQLVEVNAQPSGIEIQEALEAFITPILKAREDQQHTAP
IKHICEKKSSLINSFWRIHMGPRKCPNCRASRVTVRREHNSKLIVTHGSSTASTEKDDDS
LITKRGFLTPSLAREHVIKLWEKEGFFLKHLFSGFDMNNSEKGFSPEVFFLELLVVPPCR
YRPVNRLGDQMFTNGQTVNLQAVLKDNFLIQKLLALIAAEKTNAIKDTQTEIEQSSESTE
ISQIDQTFLTGIQGLTLTDKLYNMWIRLQSHVNIVFDSDMDKLMTEKFPGIRQLLEKKEG
LFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLN
GPSVHPGASMVINEDGSRTILSSSNLTQREAVAKQLLTPSTGQHRIPMKIVNRHIKNGDV
LLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAE
AYTLVSTDQQYLVPKDGKPLAGLIQDHMVSGASMTIRGCFFTRDQYTALVYRGLTDKIGR
VKLLPPALFKPVPLWTGKQVVSTLLLNVIPENSIPLNLMGKAKIPSKAWVKEPPRPVPGY
KPETMCESQVVIRQGELLLGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTA
YLQLYRGFTLGVEDILVKDGANKQRRKIIQKSVTCGSKALQAAFNLPAAAGDTEARERWQ
DAHLNTDQRDFNMVDLKFKEEVNQVNNNINKVCMPLGLHRSFPENNLQLMVQSGAKGSTV
NTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYEPQPRSGGFVTGRFLTGIKPPEFFFH
CMAGREGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIP
KTQFLQPQQFPFIKDNYEVIRKSKCLDEVLAKMHPEAAFNHFKAIKRWKAKHEHVSPRDG
AFLLYSQKKLSKLKSQIEDQTLANGREPATLQLLENWRALDESGRKKYLKKTSHCPDPCL
GLYRPDICFGSVSETFDSIVESYLDQFSVKQEFQTSSEITDTDRLRNLLQLKWQRSLCDP
GEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSIP
VLVNKKALKRVKTLRKKLTRVCLSEVLHKVDVIETFRSVEKRSQKSRVFNLSFHFLPPER
YQQDKLLAPNEILHFMEQKFFRMLLEAIKKLSAKLAAVNVVDTRKATASDNDRDAGAIAH
KEDDADEEAENNRIVDDEANEGDTDATDSRRKEKQEEEVDYESEEGEEAIDEELEDVAED
RQEEAGSQENSEEGSGESQSAHQSPDISEELEGASQDSMRISTVLQLSSAIEDYKYDTKN
GLWCELTMVLPLTKVHFDLTSVVVKQAQNAVIKTKGITRCLLNEVTTKEGKKEMVLNTEG
INMHEMFRHADILDLNRLYSNEVHAMANTYGIEVALRVIEKEIKDVFAVYGIEVDPRHLS
LVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSYKFLKQATMLGSYDKLNSPSACLVV
GKVVKGGTGLFDLKQPLQ
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttcaaaagaaacaccatggaggcgattagagggcatgtcgtttggcttgttc
tccgccgatgaaataaggaagctgagtgtgaaaagtatcactaattcccagctgctggat
aatgtgggcaatgccgccgctaacgggctgtatgacctggcgctgggtccagctgataac
aaggagatctgctccacctgcatgcaagacttcaccagctgtcctggccactttggtcac
gtagatctgccccttcccgtctacaacccgatgttttttgataaattatatttgctcatc
cgtggttcatgcctgggatgccatatgttgaagtgtcccagaacggctgttcatttactg
ctgggccagctgaagctcctggacgtgggtgcgatgacggaggtgtatgagcttgagaac
gttctcaatcagttggtggaggtcaatgctcaaccatctggaatagaaatccaagaagct
ctggaggcgttcatcacacccattcttaaagccagggaagaccagcagcacactgccccg
attaagcatatctgcgagaaaaagtccagtctcattaacagtttctggagaatacacatg
ggcccaaggaaatgtccgaactgcagagccagcagagtgactgtgcgcagagaacacaac
agcaaactcatcgtcacacatggatcatccacagcaagcacagaaaaggacgatgactca
ctgataaccaaacgtggattcttgactccgagtttggcgcgagaacacgtcatcaaactc
tgggagaaagaaggtttcttcctgaagcatctgttctcagggtttgacatgaacaactcg
gagaaaggcttcagccctgaagttttctttttggagttgcttgtggttcctccatgcagg
tacaggcctgttaatcgtttgggagaccagatgttcaccaacggacagactgtgaacctc
caggccgtgttaaaggataatttcctcattcagaaactgctcgctctaatcgctgctgag
aagaccaacgctattaaagatacacagacagagatagagcagtccagcgaatctacagag
atcagtcagatagatcagaccttcttaacgggaatccaagggctgactctcacagacaag
ctgtataacatgtggatccgcctgcagagtcacgtcaacatcgtgtttgacagcgacatg
gacaaactgatgactgagaagttcccaggcatccgtcagctcttggagaagaaagagggt
ttgttcaggaaacacatgatggggaagcgtgtggattacgctgcacgctctgtcatttgt
cctgatatgtacatcggaaccaatgagattggaataccaatggtttttgctaccaagttg
acgtacccacagccggtgacaccctggaacgtgaaggaactccggcaggcggtgctgaat
ggacccagcgtccaccctggagcctccatggtcattaatgaagacgggtcccgaaccatc
ctcagcagcagcaacctgacccagagagaagccgtggccaaacagctcctgacccccagc
accggccagcacaggatacccatgaagattgtaaatcggcacatcaagaacggggatgtg
ctgctgttaaaccgtcagcccactcttcacagaccatcaattcaggcccactgtgctcgc
atcctgcccggagagaaagtgctcagactacattacgccaactgtaaggcctacaacgct
gactttgacggtgacgagatgaacgctcacttccctcagagtgagctgggcagagctgag
gcctacacgctagtgagcacagaccagcagtacttagtgcctaaagatgggaagccattg
gccggcctgattcaggaccacatggtgtctggcgccagcatgaccatccgaggctgtttt
ttcacacgggatcagtatacagcgctagtctacagaggcctgacggacaagatcggcaga
gtaaagctcctgcctcctgcgctctttaaacccgtgcctctctggactggaaagcaggtg
gtgtcgacccttttgctgaatgtcatcccagaaaacagcatccctttaaacttgatggga
aaagcaaagattcccagtaaagcctgggtgaaggaaccccccagacctgttccaggatac
aagccggaaaccatgtgtgaatctcaggtggtcattcgtcagggagagctcttgctggga
gttctggataaagctcactatggcagctcagcgtacggtttggtccactgctgctacgag
ctctacggaggagagaccagcggcaaactgctcagctgtctggcacgactcttcactgcc
tacctgcagctgtaccgcggtttcaccttgggtgtggaagatattctagtaaaagatgga
gccaacaaacagagaaggaaaattatccaaaagtcagtcacatgtggctccaaggctctc
caggctgcgtttaacctgcctgcagctgctggagacactgaagccagagaacgctggcaa
gacgcacatctgaacacagaccagagagatttcaacatggtggacctgaagtttaaagag
gaggtcaatcaagtgaacaacaacatcaacaaggtgtgcatgccgctgggtcttcaccgc
tccttcccagaaaacaacctccagctgatggtgcagtcaggagccaagggttcgactgtt
aatactatgcagatctcctgtttattgggtcagattgagctggagggccgccggccgcca
ctgatgccttctgggaagtccctgccctgctttcagccctatgaacctcagccgcgatcc
ggaggattcgtaactggcagattcttgacgggaatcaaacctcctgagttctttttccat
tgtatggctggtcgtgaaggtctcgtggacactgctgtcaaaaccagtcgatctggttat
ttgcagaggtgtgtgatcaagcatctagaaggtctggtggtccagtatgatctgactgtg
cgagacagtgatggaagtgtggtccagtttctttacggagaggacggcctggacatcccc
aagacccagttcctacagccgcagcagttccctttcatcaaagacaactacgaggttatc
agaaagtcgaagtgcttggatgaagttctggctaaaatgcacccagaggcagcatttaat
cactttaaagccatcaagagatggaaagccaaacatgagcatgtttcacccagagatggt
gccttcttgctctactcgcagaagaaactgagcaagttgaaatctcaaatcgaagaccag
acactggccaatgggagagagccagccactctgcagctcttggagaattggagagctctg
gatgagtctggccgtaagaagtatttaaagaagacgtctcattgtccggacccgtgtctg
ggtctttaccggccggacatctgcttcggttcagtgtctgagacctttgactccattgtt
gagtcctacctggatcagttcagtgtcaagcaggaatttcagacctcctctgaaatcact
gacacagatagattgaggaatctgctacagctgaaatggcagcgatctctgtgtgacccc
ggagaggccgtgggtctgctggcagcgcagagcatcggtgagccgtccacccaaatgacc
ctcaataccttccacttcgccggcagaggagagatgaatgtcacattgggtatcccaaga
ttaagagaaatactcatggttgcgagctctaacatcaaaacccccatgatgagcattcca
gttctggtgaacaagaaagccttgaaacgtgtgaagacgctgcggaagaagttaacgcgt
gtgtgtttgtcagaggtgcttcacaaagtggatgtgatagaaactttccgctcggtagag
aaacggagccagaagtcacgtgtgttcaatctctcattccacttcctgccccctgagcga
taccagcaagacaagctactcgcccctaatgagattcttcatttcatggagcagaagttc
tttcgcatgctattggaggccattaagaagctgagtgctaaactggcggctgtcaatgtg
gtggatacacgcaaagccacggcgagtgacaatgatcgagatgccggtgccattgcacac
aaagaggatgatgccgacgaggaagcagaaaacaacaggattgtggatgatgaggccaat
gaaggggatactgatgccacagattccaggagaaaagaaaaacaagaagaggaggtagac
tatgagagtgaggagggagaggaggccatcgatgaggaactggaggatgtggctgaggac
agacaggaagaggcaggttctcaggagaactctgaggaagggtctggtgaaagccaatca
gcacaccagagtcctgacatctctgaagagctggagggagcttcacaggactccatgagg
atcagcactgtgcttcagttgagctccgccattgaggactacaaatatgacaccaaaaat
gggctatggtgtgagctgaccatggtcctacccctcactaaagtgcactttgacctcacg
tcagtggtggtgaagcaggctcagaacgctgtcatcaagaccaagggtatcacacgctgc
ttgttaaatgaagtcaccacaaaggagggcaaaaaagagatggtgctcaacacagagggc
atcaacatgcatgagatgttcagacatgccgatatcctggacttgaacaggttatactcc
aacgaggttcatgctatggccaacacgtacggtattgaggtggccctcagagtcatagag
aaggagattaaagatgtgtttgctgtctatggtatcgaggtggacccacgccatctctct
ctagtggctgactacatgtgtttcgagggggtgtacaagcctctaaacagatttggcatt
caatctaacagctccccgctgcaacagatgacctttgagaccagttacaagtttttaaag
caagccacaatgctgggttcttatgacaagctcaattcgccctcagcttgcttggttgta
gggaaagttgtgaaaggaggaaccggcctcttcgatctgaaacagccgttacagtaa
DBGET
integrated database retrieval system
