Cyprinus carpio (common carp): 109107324
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Entry
109107324 CDS
T05134
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04115
p53 signaling pathway
ccar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109107324
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
109107324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109107324
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109107324
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109107324
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
109107324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
WD40_like
zf-RING_10
zf-rbx1
UvrD-helicase
zf_C2H2_10
Prok-RING_4
Sina_RING
Motif
Other DBs
NCBI-GeneID:
109107324
NCBI-ProteinID:
XP_018976141
LinkDB
All DBs
Position
33:complement(21270152..21283063)
Genome browser
AA seq
690 aa
AA seq
DB search
MSSTRQQQSGGAAGSVPGTSSGSMSSSSGGGVGAGGANSGSSGAQNGNSSANGVSSRTLG
SVAEGQSARLGLSSRKRPLYNGLINPYEDKSNDFVCPICFEMIEEAHMTKCGHSFCYKCI
RQSLEDSNRCPKCNYIIDNVDQLYPNFLVNELILKQKQRSEEKRLKRDHPNGTKWQVFQD
VLGADQENMDLANVNYILEYLLQKKKQLEAESQAAQRQILMEFLKEARRIKQQQLEQLQK
ELNFLEEDIKRVEEMSGMYTVSEMDPNLDSTVPQFEAPSPAPSSIIDPTEYMQHPFGGSS
QGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSSRMSRITDESRTVNQLDDFMECLSKFTR
YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIH
YPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF
NLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVH
YYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGHIN
EKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVS
AVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcactcggcagcagcagtccggcggtgcggcggggtccgtccccgggacgagc
tctgggagtatgagtagcagtagcggcggcggcgttggcgccggtggagcgaacagcggg
agcagcggcgctcagaacgggaacagctcggctaacggagtttcctcgcggactctgggc
tcggtagccgagggacagagcgctagactgggcttgtcgagcaggaaaagacccttgtac
aacggtcttatcaatccatatgaggacaagagtaacgattttgtatgccctatatgtttt
gagatgatagaggaagctcacatgacaaagtgtggccacagtttctgttataaatgtata
cgacagagtttggaggacagcaacagatgcccaaaatgtaattatatcattgataatgtg
gatcaactctaccccaatttcttagtgaatgaactgatcctaaaacaaaaacaaagatct
gaagagaagcgtctgaaacgggatcaccctaatggaaccaaatggcaggtcttccaggac
gtccttggtgcagatcaagagaatatggatttagccaatgtcaactacatattagagtac
ctgttgcaaaaaaagaaacaactggaggcggaatcacaagctgctcagcgccagatatta
atggagttccttaaagaagccagaagaataaaacaacagcaactggaacagttacaaaaa
gaactgaactttttggaggaggatatcaaacgagttgaggaaatgagtggtatgtacaca
gtgagtgaaatggaccccaatttagacagtactgtaccccagtttgaagctccctctcct
gcacccagtagcataatagaccccacagaatacatgcagcacccttttggtggaagctca
cagggtaaaagacaaacttggtacaacagcactctggcgtcacgacgtaagagactgaca
gcacactttgaggatctggagcagtgttatttctccagtaggatgtctcgaataacagat
gagagcaggactgttaaccaactggacgatttcatggagtgtctatcaaagtttacccgt
tacaactctgtgaggcctctggccaccctatcgtacgctagtgacctctataacggctcc
agtattgtgtccagcattgagtttgaccgcgactgtgattactttgccattgccggtgtc
actaagaaaattaaagtgtttgaatacggcactgtgatccaggatgctgtggacattcat
tatcctgtcaacgagatgacatgtaactctaaaattagctgtatcagctggagtagctac
cacaaaaatctgttagcgagcagcgactatgaggggactgtcattctttgggatgggttc
acgggacagaggtcaaaggtctaccaggaacatgaaaagcggtgttggagtgtcgatttc
aatcttatggatcctaagctcttagcatcaggatcagatgacgcaaaagtcaagttgtgg
tccaccaacctggacaattcagtagccagcattgaagcgaaggccaatgtatgctgtgtc
aagttcagtccatcctctcgatatcaccttgccttcggatgtgcagaccactgtgtgcac
tactatgacctgagaaacactaagcagcccatcatggttttcaaaggccacaggaaagca
gtgtcctatgccaaatttgtcaacggggaagagattgtgtctgcatcaacggacagtcag
ctgaaactctggaatgtgaacaagccacattgtttgcgctcatttaaaggccacataaac
gagaagaactttgtgggtctggcatctaatggagactatgtagcatgtggaagtgaaaac
aactcactgtacttgtactacaaggggctctccaagacactgctgactttcaagtttgac
actgtgaagagtgtcctggacaaggacaagaaagaggatgataccaatgaatttgtcagt
gcagtgtgctggcgagctctacctgatggggagtcaaatgtgttgattgcagccaacagt
caaggaacaatcaaggtacttgagctggtctga
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