Cynara cardunculus var. scolymus (artichoke): 112499615
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Entry
112499615 CDS
T05604
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2-like
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112499615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112499615
Membrane trafficking [BR:
ccav04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112499615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
BIG2_C
DCB
Sec7-like_HDS
Mon2_C
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
112499615
NCBI-ProteinID:
XP_024958693
LinkDB
All DBs
Position
LG 16:20017652..20029522
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AA seq
1799 aa
AA seq
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MASSEAESRLINNILVPALEKIIKNGSWRKHYKLIRQSKSVLNRITSSENRPPVSPISPP
TPSTPSSEENQSGVDLPSQSSSPGVLHDSGTNELTLAESEFILSPIINACGSETLKIAEP
ALDCIQKLIAHGCLRGEADSTGGPDAKLLAKLIDSVCRCRELGDEGVELLVLKTILSAVT
STSMRIHGDSLLQIVRTCYDIFLESKNVVNQTTAKASLIQMLVIVFRRMEADSSTEPMHP
IVVAELMEPTEKEEDGDGTMTMFVQGFISKIMQGVDGVMNPGSPVASNVGVGGVHDGAFE
TKMSTMESTNPADILDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEGERDDDIEVQIG
NKLRRDAFLVFRALCKLSMKTPPKDALSDPQLMRGKIIALELLKILLENAGSVFRTSKRF
LGAIEQYLCLSLLKNSASTLVIVFQLSCSILISLVSRFRAGLKAEIGVFFPMIVLRVLEN
VAQPNFHQKMIVLRFLERLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTTQGVPPG
VATTLTLSQEATMKLEAMKCLVAILKSMGDWMDKQLRIPDPHSAKISDVVEYSSEMKNLP
MENGVATEHELADGSDIHSEASSEASDALTIEQRRAYKLELQEGIALFNRKPKKGIEFLI
NVNKVGSSPEEIADFLKNASGLNKTLIGDYLGEREDSSLKVMHAYVDSFDFQGMDFDEAI
RTFLRGFRLPGEAQKIDRIMEKFAERYCKCNPKAFISADTAYVLAYSVIMLNTDAHNPMV
KNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKEDDLALHQRHSVNSTKIL
NLDSILNIVVQKRGEEKHTSEDLMRHMQEQFQEKARKSQSVYCAATDVFILRFMIEACWA
PMLAAFSVPLDQSHDMIVIAQCLEGFRHAIHVTAVMSMKTHRDAFVTSLAKFTSLHSPAD
IKQRNIDAIKVMVTIADEDGNYLQEAWEHILTCVSRFEHLHLLREGAPPDATFFARNQNE
SGKSKQAKSNVLPVLKRKGDGRIQQAAAAMRRGSYDSSNIGGSASAGITSEQAYNLVSNL
NMLEQVGEMNRIFARSQNLNSEAIVDFVKALCKVSMGELRSTSDPRVFSLTKIVEIAHYN
MDRIRLVWTSIWNVLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNDF
MKPFVIAMRKTSAVEIRELIIRCVSHMVLSRVNNVKSGWKSMFMVFTTAAYDNHKNIVLL
AFEIIEKIVRDYFPYITETETTAFTDCVNCLIAFTNSRSNKDISLGAIGFLGLCAAKLAE
GDIGSSRNKEKEGSEILRSPHRGNDRKYENKELANKEHHLCFWFPLLTGLSDLSFDPRPE
IRKSALQVLFDTLRNHGHHFSLSLWEGVFDTVLFPIFDHVRQAIDPSGDNSSNWEVDGDD
ELDQDSWLYETCTLSLQLVVDIFVNFYGTVNPLLKKVLTLLVDFIKRPHQSLAGIGVAAF
VRLMSNAGGMFSDDKWLEVVLSLKEAANATLPDFSFILYKDVSSMNHEDFSTPRSNVESA
ESDMQQEDSEKQQRVCLYAAISDIKCRTAVQLLLIQAISEIHNLYRPHLSVKNTIVLFDA
VRGVADHAHKINTDVALRSKLQELGPMTQMQDPPLLRLETESYQICLTLVQNLADNRPPF
DEESEVEFYLIDLCHQVLKFYVEIARPPHMTQLSPNGHPHWLIPLGSGKKRELAARGPLI
VTTLQAICSLGDSSFGKNLARFLPLLSSLIRCEHGSNEVQVALSAMLSSSVGPVLLQLC
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcggaagccgaatcccgtctcatcaacaacatcctagtcccggcgctagaa
aaaatcatcaaaaacggttcatggcgcaaacactacaagcttattcgtcagtctaaatcg
gtacttaatcgcattacctcatcggaaaaccgacctcccgtgtctcctatctccccgccg
accccttccaccccttcctctgaggagaatcaatcaggcgtcgacttgccatcacaatca
tcgtctcccggcgtcctgcatgattccggaacgaatgaactaaccctagcggaatcggaa
ttcatattatcccccattattaatgcctgcggttcggaaactcttaagatcgcagagcca
gcgctggattgtatacagaaactgatagctcatggttgcttacgtggcgaagcggattcc
accggtggaccggatgcgaagttgttagcgaaattgatcgactcggtttgtaggtgtcgt
gaattaggtgatgaaggagtagaattgttggttttgaagacgattttatctgcggtgacg
tcgacgtcgatgaggatacatggtgatagtttgttgcagatcgtgagaacctgttatgat
atttttttggaaagtaagaatgtggttaatcagacgacggccaaggcatcattgatacag
atgcttgtgattgtgtttaggaggatggaggcagattcatcaacggagccgatgcatcca
atcgtagtggcagaactgatggaaccgacagagaaggaagaagatggtgacgggacgatg
acaatgtttgttcaagggtttatcagtaagattatgcagggagtggatggggttatgaat
cccggctcacccgtagcatccaatgtgggtgttggtggggtgcatgatggggcatttgaa
acgaaaatgtcgactatggagtcaacaaatccagctgatatattggattctacagataag
gatatgttggatgctaagtattgggagattagtatgtacaagactgcattggagggaagg
aaaggagaattggtagacggggagggagagagagacgatgacatagaggttcaaatcggg
aataaacttagaagggatgcttttttggtgtttcgagctctttgtaagctatcaatgaaa
acccctccaaaagatgcgttgtcagatccacagttaatgcgagggaagattattgccttg
gagttgctcaagatattattggagaacgcaggatctgtatttagaactagtaaaagattt
ttgggtgccattgaacagtatttatgcctgtcgctattgaagaacagtgcatcaaccctt
gtgattgtttttcagctctcttgctcaattctcattagccttgtgtcaagatttagagct
ggattgaaggcagagattggtgtcttttttcctatgattgttctcagagttctagagaat
gttgctcaacctaattttcatcagaaaatgattgtactgcggtttctcgaaaggctctgt
gttgattcacagatcttggtagatatattcattaactacgattgcgatgtcaattcatct
aacatattcgagagaatggtcaatggacttctgaaaactactcaaggtgttccacctggt
gttgctactacactcacactttctcaggaggcaaccatgaaacttgaggctatgaagtgc
ttagtggctattttaaagtcaatgggagattggatggacaaacaattgcgcattcctgat
cctcattctgcaaagatatctgatgtggttgaatacagttctgaaatgaaaaatctgccc
atggaaaatggggttgctactgaacatgagcttgctgatggatcagatattcattctgaa
gcctccagtgaagcttcagatgctttaacaattgagcagcgccgtgcttacaagcttgaa
cttcaggaaggtatagcactttttaatcggaaacctaaaaagggcattgaattcttgatc
aatgtgaataaagtgggcagttcacctgaagaaatagcagatttcttaaaaaatgcttct
ggtttgaacaaaactttgattggtgattatctgggggaaagggaagattcgtcgctgaaa
gtaatgcatgcatatgtggattcctttgattttcaaggtatggattttgatgaggctatc
aggacctttctacggggctttaggttgcctggtgaggcacagaagattgatcgaattatg
gaaaagtttgctgaacgttattgcaaatgcaatccaaaggcattcataagtgctgataca
gcctatgttcttgcctactctgttataatgctaaatactgatgctcacaaccctatggtg
aagaataagatgtcagctgatgattttataagaaacaatcgtggcatagatgatggaaaa
gatttaccagaggagtacctgagatcattgtttgaacgaatatcaagaaatgagattaaa
atgaaagaagatgatttggcccttcatcaaaggcattctgttaattcgaccaagatctta
aacctggacagtatattgaatattgtggtgcagaagagaggtgaagaaaagcataccagc
gaagatcttatgcgacacatgcaagaacaatttcaagagaaagcacgtaaatcccagtca
gtttattgtgctgctaccgatgtgtttatacttagattcatgattgaggcatgctgggct
cctatgcttgccgcctttagtgttcctctcgatcaaagccacgacatgatcgttattgcg
caatgtttggaaggcttccgtcatgcaattcatgttacagcagtgatgtccatgaagact
catcgagatgcttttgtgacttcgctagcaaagtttacttcccttcattcaccagccgat
ataaaacagagaaacattgatgcgattaaggtgatggttacaatcgctgatgaagatggg
aattacttgcaggaggcatgggagcatattctaacgtgtgtctctcggtttgagcatttg
catctattaagggagggagctcctccagatgctactttctttgctcgtaatcagaacgaa
tctggtaaatcgaaacaggcgaaatcaaatgttcttccggttcttaagagaaaaggggat
ggccgaattcagcaggcagctgcagcaatgagaagaggttcatatgatagttctaacatt
ggtggcagtgcttctgctgggattacatcagaacaagcgtataatttggtgtctaacttg
aatatgttggaacaagttggtgaaatgaatcgtatattcgcaaggagtcagaatcttaac
agtgaggcgatagttgactttgtgaaagcactttgcaaagtctctatgggggagttacga
tctacatctgacccacgagttttcagtctaacaaaaatagttgaaattgcgcactataac
atggaccgtatccggcttgtttggacaagcatctggaacgtactctctgacttctttgtg
accataggctgttctgagaacctgtcaattgcgatatttgcaatggattccttaagacaa
ctgtctatgaagtttttggagagggaagagttggctaactataacttccagaatgacttc
atgaaaccttttgtgattgccatgcgcaaaactagtgctgtggagatcagagaattaata
atcagatgtgtctctcatatggttttatcgcgtgtcaataatgtcaagtcaggatggaaa
agcatgttcatggtcttcacaacagcagcttatgacaaccacaaaaatattgtacttctt
gccttcgaaataattgagaagatagtgcgagattatttcccatatataactgagacagaa
accaccgcttttactgattgtgtaaattgtctgattgcattcaccaatagtagatccaac
aaagatattagtctcggtgctattggattcttgggtttatgcgctgcaaaactagcagaa
ggagatataggttcttcaaggaataaagagaaagagggttctgaaattttgcggtctcca
catcgaggaaacgacaggaaatatgagaacaaagagttggcaaataaggaacaccatctg
tgcttctggtttccgttattaactgggctgtctgatcttagctttgacccaaggcctgaa
attaggaagagtgctcttcaagtactttttgatacattaaggaaccatggtcatcacttc
tctctgtcgttgtgggaaggagtttttgataccgtcttatttccaatctttgatcatgtt
cgacaagctattgatccttcgggtgataattcgtccaactgggaggttgatggtgatgat
gaacttgatcaagactcttggctctatgagacgtgcacactttcactccagttggtagtg
gatatatttgttaatttctatggtactgttaatccgcttttgaagaaggtgctgacatta
ctagtagatttcattaagcgtcctcatcaaagccttgctggtattggtgttgctgcattt
gttcgtttgatgagcaatgctggagggatgttttctgatgataagtggctggaagtggtt
ttatctctgaaggaagctgctaatgcaacacttcctgatttctcatttatcctttataaa
gatgttagttctatgaaccatgaagatttttcaacaccaagaagtaatgtggaatctgcc
gagtctgatatgcagcaggaagattcagagaagcagcagagggtctgtttatatgctgcc
atttctgacatcaaatgtcgcactgctgttcaacttttattgatacaggcaatttccgag
atccacaacttgtatagacctcatttatcagtaaagaacaccattgttctttttgatgca
gtgcgtggggtggcagatcatgcccacaagataaatactgatgtcgcattacgctctaag
ctacaagagctcggacccatgacgcaaatgcaggatcctccattattgcgccttgaaacc
gagtcctatcaaatctgcctcacacttgtacagaatcttgctgacaatcggcctccattt
gatgaggaatcagaagtcgaattttaccttattgacctttgtcatcaagtgttgaaattc
tatgttgaaatcgcacgccctccacatatgactcaattgtctcccaacggacacccccat
tggttgatacctttaggctcggggaaaaagagagaattggcggctcgtggcccccttatt
gtcactactctacaggctatatgtagtttgggagattcttcatttgggaagaatctcgct
cgctttttacctctgctttcaagcttgataagatgtgagcatgggtccaatgaggtccag
gtagcccttagtgcaatgcttagttcttcagttggtcctgttctgcttcagttatgttga
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