Cynara cardunculus var. scolymus (artichoke): 112500230
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Entry
112500230 CDS
T05604
Name
(RefSeq) synaptotagmin-5-like isoform X1
KO
K28063
extended synaptotagmin
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112500230
Membrane trafficking [BR:
ccav04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
112500230
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
PDZD8_N
DUF8147
Motif
Other DBs
NCBI-GeneID:
112500230
NCBI-ProteinID:
XP_024959387
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Position
LG 17:complement(35124581..35133692)
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AA seq
561 aa
AA seq
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MSFVAGLIIGIVVGIALIVVFVRSENARSVRRSALATTIAAFARMTVEDSKKLLAPEYYP
SWVVFSQRQKLTWLNAHLTKIWPYVDQAASELIKSSVEPILEQYRPAVLSSLSFSKLTLG
TVAPQFTGVSIIEDEGEGITMELEMNWDGNPNIVLDIKTRLGVGLPVQVKNIAFTGVFRL
IFKPLVAEFPCFGAVSFSLRHKKKMDFTLKVVGGDISAIPGVADALENTIRDAVEDSITW
PVRKVIPILPGDYNDLELKPVGTLEVKLVQAQGLTNKDIIGKSDPFADLYIRPLRNRMKT
SKVINNELNPIWNEHFEFIVEDISTQHLTIKVYDDEGLQASELLGCAQLQLNTLEPGKVK
DVWIKLVKDLDLQRDNKDRGKVHLELLYCPYGMENGFTNPFTSNYTMTSLEKALKSNGDA
ENGDLAQKKRSVIIRGVFSVTVISAEDLPPTDLMGKADPFVVLTMKKTGMKNSTRVVNEN
LNPVWNQTFDFVVEDGLHDMLVVEVYDHDTFGKDYMGRCILTLTRVILEGEYKDCFPLDG
AKSGKLHLNLKWMAQPIYRDS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgttgcgggattgataatcggaattgtagttgggatagcattgattgttgta
tttgttcggtctgagaatgctcgatctgtgcgtcgctctgcacttgcaacgacaattgcc
gcttttgcaagaatgacagttgaagattcaaaaaagttgcttgccccagaatactaccct
tcttgggttgtcttctcacagagacagaagttgacttggcttaatgctcatcttacaaag
atctggccctatgttgatcaggcagcgtctgagcttataaagtctagtgtggagccaatt
cttgagcaatatagaccagctgtactgtcttctttgtcgttttccaagcttactcttggc
acagttgcaccacagtttacaggagtttcaattattgaagatgaaggagaaggaataacc
atggagttagagatgaattgggatgggaaccctaatatagtacttgatatcaagaccaga
cttggagttggattgcctgtgcaggtgaaaaatattgcgtttacaggggtttttaggttg
atatttaaacccctagttgccgagtttccttgttttggagctgtatcgttttctttgaga
cacaagaaaaagatggatttcacactgaaagtagttggtggtgacatttcagccattcct
ggcgttgctgatgcccttgagaataccatacgcgatgctgttgaggattcaatcacctgg
ccagttcgaaaagttattcccattttgcctggggattacaatgaccttgaactaaagcct
gtgggaacattggaggtgaaactcgttcaggctcagggtttgacaaataaagacattatt
gggaagtcagatcctttcgccgacttatatatacgtcccctgcgcaatagaatgaaaact
agtaaagttatcaacaacgaactgaatccaatttggaatgaacattttgagttcatagtt
gaagatatttccacacaacacttgacaataaaagtatacgacgatgaagggcttcaagca
tctgaactccttggatgcgctcaattacagttgaacacacttgaacctggcaaggtgaag
gatgtgtggataaaattggtaaaagatttggatctccaaagggataataaagaccgaggg
aaggtgcacttggagctactgtattgcccatacggcatggaaaatgggttcacaaacccg
tttacttctaattacacaatgacatccctggaaaaggctcttaaaagtaatggagatgct
gaaaatggtgatctagcccaaaagaaaagatcggtaattataagaggagtgttttccgtc
actgtgatatctgctgaagacttgcctcctacagatcttatgggaaaggctgatcctttt
gttgtgcttactatgaagaaaaccgggatgaaaaacagtactagggttgtgaacgagaat
ttgaacccggtttggaatcagacgtttgactttgttgttgaggatgggttgcacgacatg
ctagttgtggaagtatatgaccatgatacgttcgggaaggattacatgggaagatgcatt
ttgacactaaccagggtcatattggaaggagaatataaagactgttttccacttgatggg
gctaaatctggtaaactccatttgaatctcaagtggatggctcaaccaatttaccgtgat
tcttag
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