Cynara cardunculus var. scolymus (artichoke): 112501824
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Entry
112501824 CDS
T05604
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112501824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112501824
Spliceosome [BR:
ccav03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
112501824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
112501824
NCBI-ProteinID:
XP_024961324
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MKTKRQDVENSEEQHSKKQKLIERSSLSPPQLGFDNALLPLATYDDDDDEDDERDGKKVE
ENDLNNRQEEEEDDEEEEYINGFGKGRHNRMIEIRRDCPYLDTVNRQVLDFDFEKFCSVS
LSNLNVYACLVCGKYFQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLD
DIRHVLNPRFSRDQVLQLDRNRQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVT
PLRNFFLIPENYMHSKSVLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG
AQSDPVEFMSWLLNTLHKDLKNPKTKSSIIHQCFQGELEVVKEIHVKNADAQSNGRNADG
GSTANNIVADTSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGESITEVVR
PRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPMPKEEE
KLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVAETLPQMVALSEAYMQI
YEQQQPAQPQPQPMQLE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaagcgccaagatgtcgaaaatagtgaagaacagcactcgaagaagcagaaa
ttaatcgaaagatcttcgttgtcgccacctcagcttggatttgataacgctctgcttcca
cttgcaacatacgacgacgacgacgacgaagatgatgaacgagatggtaagaaagtggag
gaaaacgatcttaataaccgccaggaagaggaggaagacgatgaggaagaggaatatatt
aatggatttggtaaagggaggcataataggatgattgaaatccgtagagactgcccttac
cttgacactgttaatcgtcaggttctggatttcgactttgaaaagttctgttcggtctcg
ctatcaaatttgaatgtgtatgcgtgtttggtctgtggtaagtatttccaaggaagaggt
cagaagtcacatgcatatactcatagccttgaagcaggacatcatgtctacatcaatctt
cggacagagaaagtttattgcctgcctgatggttatgaaattaatgatccttcactagat
gatattcgacatgttctgaacccaaggtttagcagagaccaagttttgcaactggataga
aatagacaatggtcaagggcgcttgatggttctgattatcttcctggaatggtggggctt
aataacatcaaggagactgactttgtcaatgtcaccattcaatctttaatgcgagtgact
cccttgagaaacttctttctcatccctgaaaattacatgcatagtaaatcagtacttgtt
caccgctttggtgagctcactaggaagatatggcatgcacggaacttcaaaggacaggtg
agtcctcatgaatttttgcaagcggtcatgaaagctagtaaaaagagatttcgtataggg
gcgcagtctgatcctgttgaatttatgtcatggcttctcaataccctgcataaagacctt
aaaaatcccaagacaaagagtagcattatccatcagtgttttcagggagaattggaggtt
gtgaaagagattcatgtaaaaaatgcagatgctcaaagtaatggcaggaatgcagatggc
gggagtacagctaataatattgtggctgataccagtagaatgccattcttgatgcttgga
ctggatttgccaccaccaccacttttcaaagatgtgatggagaaaaatataattcctcag
gttccgcttttcaacatactgaagaagttcgatggcgagtccattactgaagttgtgcgt
cctcgtatagccaggatgagatatcgcgttacaagacttccacagtatcttattctccat
atgcgtcggttcactaagaataatttctttgtggagaaaaacccaacccttgttaatttc
cctgtgaagaatctggagctgaaggattacataccattacctatgccaaaagaggaagaa
aaactgcgttccaagtatgatttgattgctaacattgttcacgatggtaaaccaggtgaa
ggatcatatagggtgttcgttcagcggaaatcagaagagctctggtatgagatgcaggat
ctccatgttgcagaaactcttccgcaaatggttgcactttccgaggcttacatgcaaata
tacgagcagcagcagccggcacagccacagccacagccgatgcagttggagtga
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