Cynara cardunculus var. scolymus (artichoke): 112503531
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Entry
112503531 CDS
T05604
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112503531
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112503531
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112503531
Membrane trafficking [BR:
ccav04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
112503531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
112503531
NCBI-ProteinID:
XP_024963316
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MDLRPSPRSGRFTPNRQNSSPSSLLSKSLSDASTQSLSSVLNNPHVSDGSWVGWWSSSTA
VQVPEFAPPPANKTPGSEISRSEFTSYLSSISEHHSRFEDIRNHSNKESRDEDAPDHHER
AGEALVACLREVPALYFKEDFSLEDGATFRAACPFSTVAENSVMQEKLSQYLDVVELHLV
KEISLRSNSFFEAQVQLEDLSLKIVEGCSRIRELKETIRLLDVDLVDSACQIQDLNLTRS
DLLALQEKLRLILYVNQSLAALKLDGDQLTGLHCFRHLEDHVAAAIDSVNSILSAEFLRV
SINDAGDRDVVILSNAKARMASWGNEDNEEHLHQEDTSSFHDRLLPLIIGLLRTAKLPSV
LRIYRDTVTSDMKTAIKSVVAELLPVLLARPLESDFKSGDRIVDADGGGSSLASKLRSLS
SESFVQLLGTIFKIVQAHLLRAAEVKKAIEWIMSNLDGHYAADSVAAAIAHGALTAELDP
VGDGQSGSFPLSTQRNIIKVSPIQAKWNDATSSSNLSKNFRADVLRENTEAVFAACDAAH
GRWAKLLGVRALLHPRLRLQDFLHIYSMSHEFVTATEKIGGRLGYSIRGTLQSQAKTFVD
FQHESRMTKLRAVLDQETWVEVDVPNEFQAIVNSLFSSESLVAGDSDDHSKSIAESYNEV
VSSSATPLPSAVVLSSTQQTEQPSQSVDGFVDGTGQTINSIRTKNEHGKSTHLISFRGVG
YHMVNCGLILLKMLSEYIDMHTVLPALSSEVIHRVLEMLKFFNTRACQLVLGAGAMQVSG
LKSITSKHLALASQVVSFVHALIPEIRRILFLKVPETRKGLLLSEIDRVSQDYKVHRDEI
HTKLVQIMRERLLVHLRGLPQIIETWSRVDETDTQPSQFARSLTKEVGYLQRVLSRTLHE
ADVQEIFKEVTIIFDIQISDAFSHVDISTPQAKARLTRDIQHILGCIRSLPSAKLSDSVA
GQLESLVQRASTERADE
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggatctacggccttcccccagatcgggaaggttcacccctaatcgacagaattcttcc
ccctcttcgttgttatccaaatcactctccgatgcaagtacccaaagcttatcttccgtt
ctcaacaacccacatgtctccgacggctcctgggtcggttggtggtcctcttcaactgct
gtgcaagtccctgaattcgctcctcctcccgccaacaaaacccctggttcagaaatatct
cgatctgaattcacatcctatttgtcctcaatatccgagcaccatagccgcttcgaagac
atcaggaaccactccaacaaggagagcagggatgaggatgcccctgatcaccatgagagg
gcaggggaagccctggtcgcctgtttgcgggaagtccccgcattgtatttcaaggaggat
ttttcactcgaagacggagcaactttcagggccgcctgcccgttttctacagtcgccgag
aactccgtaatgcaagaaaagttgtcacagtacctggacgtcgtggagcttcatctggtt
aaggagatctcactacgttcgaattcgttttttgaggcacaggttcagttagaagatttg
agtctgaagattgtcgaggggtgtagtcggatcagagaattgaaggagacgattaggctt
ttggatgtagatttagtggattcagcttgtcaaattcaggatttaaatcttacccggagc
gatttgttggcactgcaggagaagcttaggcttatattatacgttaaccaatctcttgcg
gcacttaagttggatggtgatcaactgactggcctacattgttttcgtcacctcgaggat
catgttgctgctgcaatagattctgtaaatagcattctttcagcagagtttttgcgtgta
tctattaatgatgctggagatagggatgtggtaatattatctaatgcaaaagcaaggatg
gcctcatggggaaatgaagataatgaagaacacttgcatcaagaagatacttctagtttc
cacgatcgacttctacctctaattataggcttacttagaactgcaaaactaccttctgtg
ttgagaatatatcgtgatacagttacatctgacatgaaaactgctattaagtctgttgtt
gcggagctgcttcctgttcttcttgctagacccttggagtctgattttaagtcaggcgat
cggattgttgatgcagatggtggaggctcatcacttgcaagcaaattaagaagtctttct
tctgaaagctttgttcaacttcttggtactatttttaaaattgtacaggcacacttactt
cgagctgctgaagttaaaaaagccatcgagtggataatgtccaatcttgatggtcactat
gctgctgattcagttgctgctgcaattgctcatggtgctttgactgcagaattagatcct
gtgggtgatggtcagtctggatcctttcctctttcaactcaaaggaatattatcaaggtt
tctccaattcaggcaaaatggaatgatgccacaagttcatcaaatttgtcaaaaaatttc
agagctgacgtcttgagagaaaacacagaagcagtgtttgccgcttgtgatgctgctcat
ggaagatgggcaaagctgcttggtgtccgtgctcttctccatccaaggctgaggttacaa
gactttctacatatatatagcatgtctcatgaatttgttactgcaacggaaaagattggt
ggaaggttgggatatagcatacgtggaacattgcagtctcaggccaaaacttttgttgat
ttccagcatgaatctcggatgacaaaactgagagcagtgcttgatcaagaaacatgggtt
gaagtagatgtccctaacgaattccaggcgattgtgaattcactttttagttcggagtct
cttgttgctggtgactcggatgaccattctaagagtattgctgaaagctataacgaagtg
gtttctagcagtgctactcccttgccctcggcagtagtattatcgagtacacaacagact
gaacagccatctcagtctgttgatggatttgtagatggcactggacagactattaacagc
attagaacaaagaatgaacatggaaaatctactcatttgatttccttcagaggtgttggg
taccacatggtaaactgtggcttaatcttgctgaagatgttgtcagagtacattgatatg
catactgttttgccagcactttcctccgaggttattcaccgtgttcttgaaatgttgaaa
tttttcaacacaagggcttgtcagcttgttcttggtgctggtgccatgcaggtctctggt
ttgaagtctattacatccaaacacttggcattggcaagtcaggttgtcagtttcgtgcat
gctcttatccctgaaattaggaggattcttttcctgaaagtacctgagactcgaaaaggc
ttgctgttatcagaaattgaccgagtatcacaggattataaagtgcatcgtgatgagata
catacaaagctggtgcaaataatgagggaaaggttattagttcatcttcgtgggctgcca
caaattattgaaacatggagccgcgtagatgagaccgatacacaacccagtcagtttgct
cgatcactcacgaaggaagttggatatcttcaacgtgtgctttctcgcactttgcatgaa
gcagatgttcaagaaatattcaaagaagtgactattatcttcgacatacaaatctctgat
gcattttcacatgtggatattagcactccacaagcaaaagccaggctcactcgtgatatt
cagcacattcttggatgcattagatcattgccttctgccaagttaagtgactcggttgca
ggacaacttgaatccttggtccaaagagcatctactgaaagagcagatgaatag
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