Cynara cardunculus var. scolymus (artichoke): 112504819
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Entry
112504819 CDS
T05604
Name
(RefSeq) pumilio homolog 5-like
KO
K17943
pumilio RNA-binding family
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
NABP
Motif
Other DBs
NCBI-GeneID:
112504819
NCBI-ProteinID:
XP_024964542
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MATESPIRIIEASGKWLAKPSTNMGVEDLGLVLKGQRFQERKSNVAPNRSGSAPPSMEGS
FAAFENLIFRQNFAADASLASGNNASDTCESEEQLRADPSYFAYYWTHVNLNPRLPPPLI
SGENRNLFRNVRSSGSNRKLTSFDDSFSSSFHLDHSNLATHKEESDDDRSSKQEDLPRVH
SPAYNQSSPFKLESNEEADNHDDSNCTTANVSSSSSIDGRRANMSIKPPVNKNGHSDEDV
SISGVADSDISGLRNRIVALNMSNISKLESERTQRERQQEHVYRQPRNAFHVQNYHPQNG
MNSFLQNPTNFSSEVQPILQSSGFTPPPYATDAAYMPPGNHPVYPNMMPTGYFPQQYTIG
GYAFNPSPFSPYAAGYLSNTPVPSFSGQSQTSGLNLQHFNNFYGHLGLPIQPLFSEEPKP
QSLGAVGHINLNSRRVHNPSPYYFGSPTNMDFLQFPTSPFASPVMPGSPIGGAGYTGRRN
EGVYGGWKIHTGNQVIDDPKTYSFLEELKTGKGCRLELLDISGHIVEFSIDQHGSRFIQQ
KLEVCSNEEKESVFKEVLPHASRLMIDVFGNYVIQKFFEYGSAEQRRELGNQLEGQILPL
SLQMYGCRVIQKALDAIELEQKTKLVGELDGHVLQCVRDQNGNHVIQKCIESIPTEKIKF
VISSFRGQVAALSKHPYGCRVIQRVLEHSTDELHSQFIVDEILDSVYDLAQDQYGNYVTQ
YVLEGGKPEERSQIVHKLAGHIVQLSQHKFASNVIEKCLEYSDPFAKEIMIEEIIGCADG
SDNLLVMVKDQFANYVVQKVLQTCSGHQREVLLGRIKIHLNSLKKYTYGKHIVARFEQLY
GEEFEASGL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaaagcccaattcgaataattgaagcaagtgggaaatggcttgcgaaacca
tctacaaatatgggcgttgaggatttggggttggttttaaagggccaaagatttcaagaa
agaaagagtaatgtagctccaaatcgaagcggaagtgcaccaccaagcatggaaggttca
tttgcagcctttgagaacctcatttttaggcaaaactttgcggcagatgctagtttagca
agtggaaacaacgctagtgatacgtgtgagtcggaagagcagcttcgtgctgacccatcg
tattttgcatattactggacccatgtaaatttaaatccgaggctccctccaccattgatt
tcgggcgaaaacagaaatctcttccgcaatgtacgaagtagtggaagtaatcggaaattg
acatcttttgatgattctttcagcagctcttttcatctggatcacagtaatcttgctact
cataaggaagagtctgatgatgatagatcatcgaaacaggaagatcttcctcgagttcat
tcacctgcatataatcagtctagcccgttcaaactcgaatcgaatgaggaagcagataat
catgatgactccaactgtacaactgccaatgtttcaagttcatcatctatagatggtaga
cgggccaatatgtcgattaagccacccgtgaacaaaaatggtcattcagatgaggatgtt
tcaattagtggtgttgctgattctgacatttccggtttaagaaacagaatagttgctctt
aatatgtccaacatttcaaaattagaaagcgaaagaacccaaagggagcggcagcaagaa
cacgtatatagacaaccaagaaacgcgtttcatgttcagaattaccacccgcaaaatggc
atgaattcgtttcttcaaaatccaaccaatttctcttctgaggtacaaccgatacttcag
tcctctggattcaccccaccaccttatgcaaccgatgccgcctatatgccacctgggaac
caccctgtgtacccaaatatgatgccaactggatactttcctcaacaatacactatcggt
ggatatgctttcaacccgtcacctttttcaccatatgcagctggatatctttctaatact
cctgtcccgagctttagtggtcaaagtcaaacttctggactcaatttgcaacattttaac
aatttctacggacacctcgggttacccattcaacctctgttttcagaagagccaaaacca
cagtctttgggagctgtgggccatattaacttgaactcaagaagggtgcataatcctagc
ccttactattttgggagcccaacaaatatggatttcttgcaatttccgacttcgcccttt
gctagtccagtaatgccaggatcaccaattggtggggccggttacactggtaggagaaac
gaaggtgtgtatggtggatggaagattcatacaggaaatcaggttatagatgatccgaaa
acatattcttttcttgaagagttgaaaactggtaaaggttgcaggttagagctattagac
atttcgggacatattgttgaattcagtattgatcaacatggaagtcgattcattcaacag
aagttggaagtttgtagcaatgaggagaaggaatctgtgtttaaagaagttcttcctcat
gcttcgagactaatgatcgatgtttttggtaactacgttattcaaaagttttttgagtat
ggaagtgccgagcagaggagggaactcgggaaccagcttgaaggtcaaatattgccttta
agtctgcagatgtacggttgccgtgtaatccaaaaggcccttgatgctatcgagctagaa
caaaaaacaaagcttgtcggtgaactggatggacatgttttacagtgcgttcgtgaccaa
aacgggaatcatgtaatacagaagtgtatcgagagtattccaaccgagaaaataaagttt
gtgatatcttcttttcgtggtcaagttgcagccttgtcaaaacatccgtatggttgccgt
gtgatacagagggtactagaacattctacggacgaactacacagccaatttatagttgac
gagattttggactctgtttatgatcttgcacaagatcagtatggtaattatgtaacgcag
tatgtattggagggggggaaacccgaagaaagaagccaaatcgtacacaagttggcaggc
catatagtacaactaagccaacacaaatttgcatcgaatgttattgaaaaatgtttggaa
tatagcgacccattcgcaaaggaaatcatgatcgaagagattattggatgtgctgatggc
agcgataacttattggttatggtgaaggaccaatttgcaaattatgtggtccaaaaggtt
cttcaaacatgtagcggccaccaacgagaagtgttacttggccgtataaagattcatctc
aattcgttgaagaaatatacttacgggaaacatattgtcgctcgctttgaacaactgtac
ggtgaagaatttgaagcgtcagggttataa
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