Cynara cardunculus var. scolymus (artichoke): 112507907
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Entry
112507907 CDS
T05604
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112507907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112507907
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112507907
03012 Translation factors [BR:
ccav03012
]
112507907
04131 Membrane trafficking [BR:
ccav04131
]
112507907
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112507907
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112507907
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112507907
Translation factors [BR:
ccav03012
]
Eukaryotic type
Elongation factors
112507907
Membrane trafficking [BR:
ccav04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112507907
Exosome [BR:
ccav04147
]
Exosomal proteins
Proteins found in most exosomes
112507907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
112507907
NCBI-ProteinID:
XP_024968429
LinkDB
All DBs
Position
LG 1:complement(8048772..8051862)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQLNEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPSGLTTEVKSVEMHHEALLEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKITKAAIKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaaggttcacatcaacattgttgtcattggtcatgtcgactctggaaag
tcgactactaccgggcacttgatctacaagcttggaggtattgacaagcgtgtgattgag
cgttttgagaaagaagctgctgagatgaacaaacgttctttcaagtatgcctgggtgttg
gacaagcttaaggctgagcgtgaacgtggtattaccattgatattgccttgtggaagttt
gagactaacaagtactactgcactgtcattgatgctcctggacatcgggattttatcaag
aacatgatcactggaacctctcaggctgattgtgctgttctcattatcgactccaccact
ggtggttttgaagctggtatatccaaggatggtcagactcgtgagcatgctttactagcc
ttcacccttggtgtcaggcaaatgatctgttgttgcaacaagatggatgctacgacaccc
aagtactccaaggctaggtatgatgaaatcattaaggaagtgtcatcctacctcaagaaa
gttggatacaatcctgacaaaatcccatttgttccaatttctggttttgagggagataac
atgattgagaggtcaaccaatctcgactggtacaagggtccaactcttcttgaagcgctt
gaccagcttaatgaaccaaagaggccatcagacaagcctcttcgtctcccactccaggat
gtttacaagatcggtgggattggaaccgtgccagttggccgtgttgaaactggggtcatc
aagcctggtatggttgttacttttggcccatctggtttaaccacagaagtgaagtcggtt
gaaatgcatcatgaggcactccttgaggcgttgccgggtgacaatgttggtttcaatgtg
aagaatgttgctgtgaaagatcttaagcgtggttacgttgcttcaaactccaaggatgat
ccagcaaagggtgcggcaaatttcactgctcaggtcattatcatgaaccaccctggccaa
atcggaaacggatatgcacctgtgctcgattgccacacttctcacattgccgttaagttt
gctgagctgttgaccaaaattgacagaaggtcgggtaaggagctcgagaaggagccaaag
tttttgaaaaatggtgatgcaggtatggtgaagatgattccgaccaagcccatggtggtg
gagacgtttgcagagtatcctcctcttggacgttttgctgtgagggatatgcgtcaaact
gttgctgttggcgtgattaagagcgtggacaagaaggacccaactggtgccaagataact
aaggctgctatcaagaagaagtga
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