Cynara cardunculus var. scolymus (artichoke): 112509263
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Entry
112509263 CDS
T05604
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1-like
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112509263
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112509263
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112509263
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
112509263
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class II (A)
112509263
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112509263
Prokaryotic type
112509263
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
DUF7386
Big_1
Motif
Other DBs
NCBI-GeneID:
112509263
NCBI-ProteinID:
XP_024969893
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All DBs
Position
LG 1:14424172..14429520
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AA seq
566 aa
AA seq
DB search
MADDGVLPVDKLTISDTVEEAEFSQRVLIRSILGRPDGGAGLAGKTLKVGGWVKKGREQG
KGSFAFLELNDGSCPANLQLIIYSDVAPLGQFTPTGTCLHVEGVLQMPPEDKQGKQSIEL
RVSKVLDVGTVDPAKYPLPKTRLTLEFLRDYVHLRPRTNTISAIARIRNALAFATHTFFQ
KHGFLYVHTPIITTSDCEGAGEMFQVTTLINEAEKLEKELIKNPPPSQEEVDMAKGVVKE
KGEIVAKLKSDKAGKSVITAAVAELTKAKENLSKLEERFNQKPGIPKKDGKVDYGQDFFA
RQAFLTVSGQLQVETFACALSSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADIEDDM
KCAEAYVRFLCQWLLDNCYDDMEFMAEKFDKKAIQRLQMVASTNFIRLSYTEAVKILEEA
VSKGHKFENKVEWGIDLASEHEKYLTETKFESPVIVYNYPKGIKAFYMKVNPDNKTVAAM
DVLVPKVGELIGGSQREENYEIIKERILEMGLPLEPYEWYLDLRRYGTVKHSGFGLGFER
MILFATGIDNIRDVIPFPRYPGRADL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatggagtgctgccggtcgataagttaacaatttccgacactgtcgaagaa
gccgaattctcacaacgtgttctgatccgatcaattttaggccgtcctgatggcggcgct
ggtcttgccgggaagaccttgaaggtaggcggttgggtgaagaaagggagagaacaaggc
aagggatcatttgcgttccttgaacttaacgatggatcctgtccggcgaaccttcaactg
ataatttactccgatgtagcgccgctaggccaattcactcccactggcacgtgcctgcac
gtggagggcgtgcttcagatgcctcctgaagataaacaggggaagcagtcgattgaactt
agggtttcgaaggtcttagatgttgggactgtggatcccgctaagtatccgttgcccaaa
acgcgattgacacttgaatttttgagggattacgttcatcttcggcccagaactaacact
atttctgctattgctcgaattcgtaatgcactagcttttgcaactcacacattcttccaa
aagcacgggtttctttacgtgcatactccaatcatcaccaccagtgattgtgaaggtgct
ggagagatgtttcaggtcacaactctgattaatgaagcagaaaagttggaaaaagaactg
ataaaaaatcctcctccatcccaagaagaagtggatatggccaagggtgttgtcaaggaa
aaaggtgaaatagttgccaagttgaagtctgataaagctggtaaatctgtaataacagct
gcagttgcggaacttactaaagcaaaagagaatctttcaaagcttgaagagagatttaac
caaaaacctggtattcctaagaaggatgggaaggttgattatggtcaagatttttttgcc
cgtcaggcgtttctaactgtttcgggacaacttcaagttgagacttttgcttgtgcactt
agtagtgtttacacttttgggccaactttccgagctgaacattctcatacttcaaggcat
cttgccgaattctggatggttgagccagaaatagcttttgcggatattgaggatgatatg
aagtgtgcagaggcatatgttaggtttctatgccaatggttacttgacaactgttacgat
gatatggaatttatggctgaaaagtttgataaaaaagctattcaacggctacaaatggtt
gcttcaaccaacttcatacgcctttcatacacagaagcagttaaaattctcgaggaagct
gtttctaaaggccacaagtttgagaacaaagtagaatggggaattgatttggcatcagaa
catgaaaaatacttgacagagaccaaatttgagtcgcctgtgattgtatataactatcct
aaggggatcaaagcattttacatgaaagtcaaccccgataacaaaacagtagctgctatg
gacgttcttgtgccaaaggtgggtgaactaattggaggaagccaaagagaggagaattat
gagatcatcaaagaaaggattcttgagatgggactgccacttgagccatacgagtggtac
cttgacctgcgtcgctatgggaccgtgaagcatagtgggttcggtctaggattcgagagg
atgattctttttgcaactggaatcgacaatattagggacgtaattccctttccaaggtat
ccaggaagagcagatctttga
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