Cynara cardunculus var. scolymus (artichoke): 112512462
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Entry
112512462 CDS
T05604
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00906
Carotenoid biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Module
ccav_M01040
Lutein biosynthesis, plants, lycopene => lutein
ccav_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112512462
Enzymes [BR:
ccav01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
112512462
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Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
Pyr_redox
HI0933_like
FAD_oxidored
NAD_binding_8
Trp_halogenase
Pyr_redox_3
FAD_binding_3
FAD_binding_2
GIDA
Motif
Other DBs
NCBI-GeneID:
112512462
NCBI-ProteinID:
XP_024974208
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Position
LG 5:7644235..7646340
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AA seq
426 aa
AA seq
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MYDPSKGLVVDLVVVGGGPSGLSVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAM
DLLDCIDTTWSSAVVYIDEGSSKNLGRPYGRVNRKQLKSKMLQKCISNGVKFHQAKVIKV
IHEELKSFLICNDGVTIQATLVLDATGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDV
DKMLFMDWRDSHLNNNLEIKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLKMEDIQE
RMVCRLKHLGIKVKSIEEDERCVIPMGGPLPVLPQRVLGIGGTAGMVHPSTGYMVARTLA
AAPIVAKSIIQYLGSEKGLTGTNLSAQIWKDLWPIERRRQREFFCFGMDVLLKLDLEGTR
RFFDAFFDLEPHYWHGFLSSRLFLPELFTFGLSLFSHASNTCRIEIMAKGTLPLATMINN
LAQDKE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatccctcaaagggtctagtggtggatctggtggttgttggtggcgggccgtcg
ggactttcggttgcccaacaagtttccgaggccgggctcagcgtttgctccattgacccg
tctcctaaactgatttggcccaataattacggtgtttgggtggatgaattcgaagctatg
gatttgctagattgcattgataccacttggtctagtgcggttgtttacatcgatgaaggc
tcttccaagaatcttggaaggccttatggaagggttaataggaaacagcttaaatcgaag
atgttacagaagtgtatatcgaatggcgttaagttccatcaagcgaaagtaatcaaagtg
attcatgaagaactcaaatcattcttgatttgcaacgatggtgtcacgattcaagcaaca
ctcgttcttgatgcaactggtttttctcgatctttagttcagtatgataagccttacaat
cccggttaccaagtggcttatggaattctagcagaagtcgaggaacacccttttgatgtc
gataaaatgctcttcatggattggagagattcacatctcaataacaatcttgaaatcaaa
gaaagaaactcaaagatcccgacctttctttacgcgatgcccttttcgtccaatcggatc
tttcttgaagaaacttcccttgtggctcgtcccggattaaaaatggaagatattcaagaa
agaatggtttgtagattaaagcatttgggtataaaagtgaaaagcatagaagaagatgaa
cgttgtgttatcccgatgggcggccctcttccagttctgccacaaagagttcttggaata
ggcggcaccgctgggatggtgcacccttccaccggatatatggtggctagaaccttggcg
gctgccccaattgtggctaaatccataattcagtatcttggttctgaaaaagggctcacc
ggaaccaatttatcagcacaaatttggaaagatttgtggccgattgagagaagaagacaa
cgcgagttcttctgtttcggtatggatgtcttgcttaagctcgatttggaaggaacccga
aggttttttgatgcgttttttgatctagaaccgcattactggcatgggtttttgtcatca
cgattgtttctacccgaactattcactttcgggctttctcttttctctcatgcctctaat
acttgcaggattgaaatcatggcaaaaggaactctgccattggcaaccatgataaacaat
ttagcccaagataaagaatag
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