Cynara cardunculus var. scolymus (artichoke): 112515131
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Entry
112515131 CDS
T05604
Name
(RefSeq) protein RBL isoform X1
KO
K14961
COMPASS component SWD1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112515131
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
112515131
COMPASS/SET1 complex (yeast)
112515131
MLL-HCF complex
112515131
MLL3/MLL4 complex
112515131
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Ortholog
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GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Cytochrom_D1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
112515131
NCBI-ProteinID:
XP_024977572
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Position
LG 7:10204379..10210297
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AA seq
564 aa
AA seq
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MNAPIIDPLQGDFPEVIEEYLEHGIMKCISFNRRGTLLAAGCSDGSCVVWDFETRGIAKE
LRDKDCVAAITSVCWSKNGHQILVSAADKSLCLWDVVKGEKIFRTTVHQTPLQARLHPGG
GSSESTLCLVCPFSSAPMIVDLRNETTTMLPISLSDKGSGLAPPSRNKFSDGAAHFTPTA
ACFNKYGDLVYVGNSVGEILIINHKDNRVRGVVPISGNAVIKTIVFSRDGRYLLTNSSDR
TIRIYDNLLPLKDSLKALDEIHEPTNEVETLKAVGLKCLSLFREFQDSITRVHWKAPCFS
GDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALMDLAWHPVHPIVVSVSLAGLVY
IWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLMPESEKVKESETNEDDEVDIITVEK
DSAFSDSDISQDELCFLPADPCPDVPEQDKHAGSTSKLGDSKNSDSPLSEETAVDGRAMN
HDSNQIEGLENSGAEDTAGVTHLKRRRKPSEKVLELQQAQKVRKPLQKAKAAASSGKSSK
TKTKFGIEQEHDMNHFADENGIDD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccaattatagatccgttgcagggggattttccagaagtgatagaagagtat
ttggaacatggtatcatgaaatgcatttcttttaatcgtcgtggcactcttcttgctgct
gggtgttccgatggaagctgtgttgtctgggactttgagaccagaggaattgcaaaagaa
ctcagggataaggactgtgttgctgccataactagcgtttgctggtcaaaaaacggtcat
caaatacttgtttcagctgccgataagtcattgtgtctatgggacgttgtgaagggagag
aagatcttccgaacaacagtgcatcaaaccccgttacaagctcgtttacatccgggtggt
ggctcttcagaatcaactctttgtctagtttgtcctttctcgtctgcgcccatgatcgtt
gatttgcgcaacgaaaccacaactatgctcccaatatcattgtctgacaaaggcagtgga
ctcgcccctccatcacgcaacaaattttcagatggagcggcccattttacaccaacagca
gcctgcttcaataagtatggggatctggtttatgtggggaattcggtaggggaaattctt
ataatcaatcacaaagacaatcgggttcgtggtgttgtcccaatttccggcaatgcagtg
ataaagactatagtattcagtagagatgggcgctaccttcttacaaactcaagtgaccgt
acaataaggatatatgacaatcttttgcccttgaaagattcactcaaagctcttgatgaa
atacatgagcccacaaatgaggttgaaacgttaaaggcagtcggtttgaaatgtttgtcg
ctctttcgggagtttcaagattccatcaccagagttcactggaaagcaccgtgttttagt
ggcgatggtgagtgggtcgttggcggttctgctagtaaaggcgagcacaaaatatacatt
tgggatagggctgggcatcttgtgaaaattcttgaaggtccaaaggaagcattgatggat
ttggcgtggcaccctgttcacccaatagttgtttctgtgtcattggccggtttagtttac
atttgggccaaagattacaccgagaattggagtgcatttgcaccggattttaaggaactt
gaggaaaacgaggagtatgtggaacgagaagatgagtttgatttgatgcccgaaagtgaa
aaggtgaaagaatcggaaacaaatgaagatgatgaagttgatattataaccgtggagaag
gattcagcatttagcgattcagatatctcgcaggatgaactatgcttcttgcctgcagat
ccgtgtcctgatgttcccgagcaggataaacacgctggaagtacttcaaaactaggtgat
agcaagaactctgattccccactttcagaagagacggcagtcgatggccgggcaatgaac
catgattccaatcaaatcgaaggactggagaattctggtgctgaagatacggcaggggtg
acgcacttgaaaagaaggcgaaagccgtccgagaaggtgttggaactgcagcaggcacag
aaggttaggaaaccgttacagaaagcgaaagccgcagcttcttcaggtaaatcttcaaaa
accaaaactaaatttgggattgaacaagaacatgatatgaatcattttgcagatgagaat
gggattgatgattag
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