Cynara cardunculus var. scolymus (artichoke): 112516559
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Entry
112516559 CDS
T05604
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112516559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112516559
Membrane trafficking [BR:
ccav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112516559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
112516559
NCBI-ProteinID:
XP_024979439
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All DBs
Position
LG 8:complement(1467906..1483029)
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AA seq
1080 aa
AA seq
DB search
MATPGGPRPGNLPPNYNPNSIADNLHNLQINRPNQPPYPGNGPRGPPPAFGQQPNSQSQP
FPSSGPYSSSPFSGPSRPGPPPPGVAPRGAGPPSSGPPHGSMPPFMAANRPTGGGGGGTS
SSNAPPMPASRPLTSGPLPSSAPVGPPGPFASSPLTSGPPGPPPNVGGGSMSNGPPTFGS
QSMQGGPQYPSANVRPRPSTGPPPAPQTMSSFLGGPADNQPRGPVPPFSAPPRGMQPPTG
PPPFSAQGQGAPHPQGSPFGAQPWQMQSRQNAPPPPISGSAQPPRMFGMPPPLPNQQSMA
TISPATGPSGNAVSGPSKIDPNQIPRPVPSSSVLLHETRQGNQANPPPPATSEFIARDTG
NCSPRYMRSTINQIPCTSDLLNTSGMQLALLVQPLALPHPSEEPIQIVDFGEGGPVRCSR
CKGYINPFMKFVDQGRRFICNFCGFTDETPRDYQCNLGPDGRRRDADERPELCRGTVEFV
ATREFLVRDPMPAVFFFLIDVSMNAVQTGATAGACSAISRVIADLPEGPRTFVGIATFDS
TVHFYNLKRALQQPLMLIVPDVEDVYTPLQTDVVVPLSECRQHLDLLLESIPTMFQNNKT
ADSAFGAGMKAAFLAMKSTGGKLLVFQSVLPSVGIAALSAREAEGRTNISAGDKEPHRLL
QPVDKTMKTMAIEFAEYQVSVDVFITTQSYVDIASISVIPKTTGGKIYYYHPFSALSDPA
KLYNDLRWNVTRPQGFEAVMRVRCSQGLQVQEYSGNFCKRIPTDVDLPAVDCDKSIMVTL
KHDDKLPDGTECSFQCAILYTTIYGQRRIRVSTLSLPCTTMLSNLFRSADLDTQFSCFLK
QAANEISSAPLLQVRDRVTDLCINILHSYRKFCATVSSSGQLILPEALKLLPLYTLALIK
SIGLRTDGRIDDRSFWINYVSALSVQLAIPLVYPRMMSIHDLNSKEMDGSVIPSPIPLSS
EHVSDDGIYLLENGEDCLIYIGSSVDPDITQKLFGISSASEIPSQFVLEQYDNPLSKRLH
EVVNEIRSQRCNYLRLRLCKKGDPSGMMFFSYMVEDKSSNGLSYVEFLVHVHRQIQSKMT
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccaggtggacctagaccaggaaatctcccaccgaattataaccctaattca
attgctgataacttgcataacctacaaattaatcgccctaatcagcccccgtacccaggg
aatggacctagaggtccaccgccggcattcgggcaacaaccgaattcccaatcccagcca
tttccttcttcaggtccatattcatcgtcacctttttctggacctagtcgtccgggacct
ccaccgcccggtgttgcccctaggggggcagggcctccatctagtgggcccccacatggt
tcaatgccacctttcatggcggctaaccgtcccactggtggtggcggtggaggtacttct
agtagtaatgcacctccaatgcctgcttcaaggcctttgacctctggacctttaccttct
tctgcacccgtgggtcctcctggtccttttgcgtcctcccctttgaccagtggtccgcct
ggtcctccaccgaacgtaggtggtggttccatgagtaatgggcctccgacgtttggatct
caaagcatgcaaggtggccctcaatatccttcagccaatgttagaccaagaccgtcaact
ggacctccacctgctccacaaaccatgtcgtcatttcttggtggtcctgctgataatcaa
ccaagagggccagtacctcctttctcagcacctccaagaggcatgcaacccccgacagga
cccccgccattttctgctcagggacaaggcgcacctcatccacaaggttctccgtttggg
gctcaaccatggcaaatgcaatcacgacaaaatgcaccacctcctccaatctctggttct
gctcaaccaccaagaatgtttggcatgccaccacctcttcctaatcaacaatctatggcc
acgatatcgcctgcaacaggtcctagtggaaatgctgtttcaggaccatcaaagattgat
cctaaccaaatcccacgtcccgttccaagttcatcagttcttctgcatgaaactcgccag
ggtaaccaggccaatcctccgccgcctgctacaagtgaatttattgcaagggacactgga
aattgcagtccccggtacatgaggagtactattaatcagattccttgcacttccgatctt
ttgaacacttctggcatgcaattggctctgttggtccagcccttggcccttcctcatccg
tccgaggagcctattcaaatagttgattttggtgaaggtggtcctgttcgttgttctcgt
tgcaaaggctacatcaatccgtttatgaaatttgtcgatcagggaagacgttttatctgt
aacttctgtggcttcacggatgaaaccccccgtgactatcagtgcaatctaggtccagat
ggcaggcgaagagacgcagatgaaaggcctgagctatgcagaggaacagttgaatttgtt
gctacacgggaatttctggtacgtgatccaatgccggctgtattctttttcctcattgat
gtatcaatgaacgccgtgcaaactggtgcgacagcaggagcttgcagcgcgatcagccga
gttattgccgatcttccagagggtcctcgaacattcgtgggaattgctacgtttgactcg
accgtccatttttacaatctgaaacgtgcattgcaacagccattgatgctcatagttcct
gatgtagaagatgtttacactcctctccaaactgatgttgttgttccactttctgagtgt
cgtcaacatctagacctgttgctggaaagcatccccaccatgttccagaataataagacg
gctgattcagcttttggtgccgggatgaaggctgcttttctggcaatgaagagtaccgga
ggcaaacttttggtatttcagtcagtcttgccttctgtcggtattgcggctctttccgct
agagaggctgaaggaagaactaatatatccgcaggagataaggaacctcatagattactt
caaccggtagacaagactatgaagacaatggctattgaatttgcggagtaccaggtctcc
gttgatgtgttcattactacccaaagttacgttgatattgcttctatctcggttatccct
aagacaactggagggaagatatactattatcatccgttctctgcactttccgatcctgca
aaactatacaacgatcttcgatggaatgtcacaaggccacaaggttttgaagcagtgatg
cgtgttagatgcagccagggtcttcaagtacaagaatattctgggaacttctgtaaacgc
attccgacagatgttgacctacctgcggttgattgtgacaaatctataatggtaactttg
aaacatgatgataagttgcctgatggcacagaatgttctttccagtgcgcgattctttat
actactatatacgggcaaagaagaattcgtgtctccaccttgtcgttgccatgcacaacc
atgctgagcaatcttttccgctcagctgacctcgacacccagttttcatgttttctaaag
caggcggcaaatgaaatttcttctgccccattattgcaagtgagggatcgggtgactgat
ctttgcatcaacattcttcattcttatagaaaattttgtgcaactgtgtcatcatcggga
cagcttattcttccggaagcactcaaattattgcctttatacactctcgctttgattaaa
agtattggactgcgaaccgatgggcgtatagatgaccgatcattttggatcaactatgtc
tccgcgctctctgttcaattggcgatcccacttgtatatccgagaatgatgagtattcat
gaccttaactcaaaggaaatggatggatccgttattccttctcctataccactttctagt
gaacacgtaagtgatgatgggatctatcttcttgaaaacggcgaggattgcttaatttac
atcggaagctctgtagatcctgatataacacaaaaactgtttggcatctcttccgctagc
gaaatccctagtcagtttgtgttggagcaatatgacaacccgttgtcaaagaggctacat
gaggttgtgaatgagatacgaagccaaagatgtaactacctaaggctaagattatgcaag
aaaggagatccatcaggaatgatgttcttctcttatatggtggaagacaagtcttcgaat
ggtctgtcatacgtcgagttcctagtacatgttcatcgacaaattcaaagtaaaatgacg
tga
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