Cynara cardunculus var. scolymus (artichoke): 112518012
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Entry
112518012 CDS
T05604
Name
(RefSeq) pectinesterase 2-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00040
Pentose and glucuronate interconversions
ccav01100
Metabolic pathways
Module
ccav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112518012
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
112518012
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Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
SbsC_C
Motif
Other DBs
NCBI-GeneID:
112518012
NCBI-ProteinID:
XP_024981289
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Position
LG 1:complement(1405310..1406972)
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AA seq
525 aa
AA seq
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MVMKLPLFICFIVTFTFSCSSETTFSGNIKWWCGQTPHYQTCDYYLSHRNFSTIASLSTT
EFLEMSVQVAIDEALVVRKRAHEIESKYPNVPGKGLWSSCVDYFDAIVFTLNSVFDRNLD
PLPLDIQTWISAAFAYINACEEGFELINMTNTILPAISSNLTELILNSLAISVVYRGRNT
PGFVDWNYPNEYKLSNNLASNGPNVVVAQDGSGDFTTVQAAVNAAANRAQPMKRFVIYVK
AGTYTENVVIPDEVGYITMYGDGIGKTIITGSRHAGGDALKTTMAGDLKSTATIQVWGRE
FIARDMTFRNTAGPYAGQALAFFSVSDQSVLYHCSFEGYQDTLYACGNKQFYKECQIYGT
VDFIFGDAAAVFQDCGIFLRRPRPGGGLVVTANGRKSHNESSGYSLQGCKITAGDDLKPV
IGQYKKAFLGRPWGAYAKTVFMENYLDDLIDPQGWMDSWGNKDTCYCGEYKNYGPGSSTA
NRVKWRSFHKITNQKSARRFTVGKLLSGNHWLPKTGVPYIAGFEN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggttatgaagcttcctcttttcatatgtttcatcgtcacattcactttctcatgttca
tcggaaaccaccttctccggcaacataaagtggtggtgcggccaaactccacactatcag
acatgtgattactatctcagccaccgtaacttctccaccattgcctctttatcaactacc
gagttcctagagatgtctgtgcaagtagccatagatgaagcactcgtggttcggaaacga
gcccatgagatcgagtccaagtacccaaatgttccaggaaaaggcttatggtcgagttgt
gttgactactttgatgcgatcgtgttcacacttaactcagtctttgatcgtaaccttgac
ccgttgccactcgatatccaaacatggatcagtgctgcctttgcctatatcaatgcatgc
gaagaagggttcgagttgatcaatatgaccaacaccattctacccgctatttctagcaat
ttgacagaactaatactcaactctttggctattagtgttgtatataggggtcgtaacact
cctgggttcgtagattggaattatccaaacgaatataagttgtcgaacaatttggcatca
aacgggccaaatgtggtggtggctcaagatggctcgggagattttacgacggttcaagcc
gctgtaaacgctgctgcgaatagagcacaacccatgaagaggtttgtgatttatgtgaag
gccgggacatacacagaaaacgttgtgattccagatgaagttgggtatattacgatgtat
ggagacggaataggtaaaacgatcatcaccggttccaggcatgcaggtggtgacgcccta
aaaacaacaatggctggtgacttgaaaagtacagcaacaattcaggtatggggccgcgaa
ttcatcgctcgagacatgacgttccggaacacggccgggccatacgcagggcaagcgttg
gcattcttctccgtctccgaccaatcagtcctctaccactgcagcttcgaggggtaccaa
gacacactctacgcgtgtggaaataaacaattctacaaagaatgccagatctacggaacc
gtagatttcattttcggcgatgctgcagccgttttccaagattgcgggatcttccttcgg
agaccacgtccaggaggtggcttagtggtgacggctaatggtcgaaagtcccataacgag
tcctccgggtattcattgcaaggctgtaaaataactgcgggtgatgatcttaagcccgtg
atcggtcagtacaagaaggcgttcctgggacgaccatggggtgcgtacgcgaagaccgtt
tttatggagaattaccttgatgacttgatcgatccacaagggtggatggatagttggggt
aacaaggacacttgttattgtggtgagtacaagaattatggacccggatcgtctacggct
aatcgggtcaaatggcgtagtttccataaaattacgaaccagaagagcgcacgtcgattt
acagttggcaagttgttgtcagggaaccattggcttcctaaaactggggtgccttatata
gctggttttgagaactaa
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