Cynara cardunculus var. scolymus (artichoke): 112522001
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Entry
112522001 CDS
T05604
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112522001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112522001
03036 Chromosome and associated proteins [BR:
ccav03036
]
112522001
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
112522001
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
112522001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
WHD_E2F_TDP
CENP-F_leu_zip
Filament_head
DUF465
YcbB
DUF1690
Motif
Other DBs
NCBI-GeneID:
112522001
NCBI-ProteinID:
XP_024986810
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All DBs
Position
LG 11:complement(7253620..7260021)
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AA seq
355 aa
AA seq
DB search
MVRMGSNDNLENVVGNTNPFSRGGGATRSWGTTASGQSVSTSGSVGSPSTRSEAAMAATP
ASENTFLRLNHLDIHADDAGSQGAAGNKKKRRGQRTTAGDKGGRGLRQFSMKVCEKVESK
GRTTYNEVADELVAEFADPSNTDQTPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEI
QWRGLPRTSLNDIEELKSERLALKNRIDKKTAYLRELEDQHVGLQNLVRRNEQLYGSGNA
PTGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCDGSNN
NNVCREGGGAGSSMFEGRVPLPPPPQPPRSTMAHGRPPPSPPLPGILKGRVKHEH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggatgggatcgaatgataatctggaaaatgtcgttgggaatacaaacccgttt
tcgagaggaggcggtgcgacccggtcttggggcactacggcgtcgggtcaatccgtttcc
acaagtggcagtgtcgggtcgccgtcgacccggagtgaggcggcaatggccgcgactcct
gctagtgaaaatacgttcttgaggttgaatcaccttgatatccacgctgatgatgctgga
tctcaaggggctgctggcaataaaaagaagagacgaggtcaacgtacaactgcaggggat
aaaggtggtagaggactccgccagtttagcatgaaagtctgtgaaaaagtggaaagcaag
ggaagaaccacttataatgaggttgccgatgaacttgtagctgaatttgcagatcccagc
aataccgatcaaactcctgaccagcaacaatacgacgagaagaatatccgtcgacgggta
tatgacgcattaaacgttctcatggctatggatatcatttctaaagataaaaaggaaata
cagtggcgaggtttgcctcgaactagtttgaatgatatcgaagagctaaagagcgagcgt
cttgcactcaagaacagaattgacaagaaaactgcttatttgcgagaactggaagatcaa
catgtaggtcttcaaaaccttgtacgacggaacgagcagttatatggctccggaaatgct
ccaactggtggagtggctttaccttttattctggttcagactcggcctcatgcgactgtg
gaggttgaaatttcagaagatatgcagctagttcatttcgacttcaacagcacaccgttc
gagctacatgatgacaattacgtcctgaaggccatgaagttttgtgatggatcaaacaat
aataatgtttgtagagaaggaggtggtgcagggtccagcatgtttgagggtcgagtccct
ttgccgccaccaccgcagccgccaaggtccaccatggcacacggcagacctccgccctca
cctccacttccgggcatactaaagggacgtgttaagcatgagcattag
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