Cynara cardunculus var. scolymus (artichoke): 112522960
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Entry
112522960 CDS
T05604
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112522960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112522960
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112522960
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Period_C
Motif
Other DBs
NCBI-GeneID:
112522960
NCBI-ProteinID:
XP_024988098
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All DBs
Position
LG 12:37501599..37506035
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AA seq
320 aa
AA seq
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MYFDGYGYHGTSFEQTYRCYPASFIDKPQLENGDKIIMPPSALDRLASLHIDYPMLFELR
NSATERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTK
DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIESKPSHAISIIETDCEVD
FAPPLDYKEPERPVTSVPSSKAPAEGEAAPVEEPKFNPFTGSGRRLDGKPLKYQPPPVSS
STGSKEKQPAVSGGGGVQPSTGSTSQSSSRQSQGKLVFGSNANSSADPQKQKEVAKETKE
VVKEEPKFQAFTGKKYSLKG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgatggttatggctatcatggaacatcctttgagcaaacatatcggtgctac
cctgcatcttttatcgataagccccagttagagaatggtgataaaattataatgcctcct
tcagcccttgatcgccttgcttctcttcatattgattatccaatgttgtttgagctacgc
aattctgctactgagcgagtttctcactgtggggttctggagttcattgcagaagaaggc
atgatttatatgccttattggatgatggaaaatttgcttttacaagaaggagacattgtg
cgagtaaaaaatgtgaccctcccaaagggtacatatgttaaattacaaccacacacgaag
gacttcttggatatctccaacccaaaagcaatcttagagacaacattgaggaacttctct
tgtttgacaacaggagatagcatcatggtggcatataacaacaagaaatactacatagat
atcattgaatcaaaaccttctcatgcaataagtatcatcgaaaccgactgcgaggtggac
tttgctcctcctctagattacaaggagcctgagagacctgtaacatctgttccttcaagc
aaggcaccagcagaaggtgaggctgctccagttgaggagccaaagtttaacccatttact
ggatcagggagaaggttggatggtaaacctttgaagtaccagcccccgcctgtttcgtcc
tccactggatctaaagaaaagcaacctgctgtatctggtggtggtggtgtgcagccatct
acaggatctacttcacaaagcagttctcgtcaatcacaaggaaaacttgtgtttggttct
aatgcaaacagtagtgcagatccccaaaagcaaaaggaagttgcaaaagagacgaaagaa
gttgtgaaagaagagccaaagtttcaagccttcacagggaagaaatactcactcaagggt
tga
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