KEGG   Cynara cardunculus var. scolymus (artichoke): 112524184
Entry
112524184         CDS       T05604                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112524184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccav03041]
    112524184
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112524184
Spliceosome [BR:ccav03041]
 Complex B
  Other components
   Prp19 complex
    112524184
 Complex C
   Prp19-CDC5 complex
    112524184
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    112524184
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect GCP_C_terminal
Other DBs
NCBI-GeneID: 112524184
NCBI-ProteinID: XP_024989671
LinkDB
Position
LG 13:13760186..13774286
AA seq 979 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDNRHRKRKRKGIDYNAEIPFEKRPPPGFYDVTDESSIVEQPKFPT
TIEELEGERRADKEARLRKQDIAKNKIAQRQDAPSAILQANKMNDPETVRKRPKMNLPTP
QIPDYELEHIAKFGLPALTDELSEGSGATRALLADYTQTPRQGMTPLRTPQRTPAGKQDA
IMMEAENQARLRLSQTPLLGGENPDLHPSDFSGVTPKKKDIQTPNPMLTPSATPGGVSLT
PRIGMTPSRDGHAFGVTPKGTPIRDELHINEEMEMHDSAKLELRRQADMRRNLRSGLTGL
PQPKNEYQIVVQPAPEDNEEQEAKIEEDMSDRMAREKAEEEARQQALLKKRSKVLQRELP
RPPVGSLDLIKNSLIRADEDKSSFVPPTLIEQADEMIRKELLSLLEHDNVKYPLDEKLEK
DKKKGSKRAGGKSVSIPAIEEFDEDELKEADQMIKEEAKFLCEAMGHKDEDLDEFIEAHR
TCLNDIMYFPTRNGYGLSSVAGNMEKLAAFQEEFENVKKRMDDDTRKAQRLEQKIKLLTN
GYQMRAAKIWSQVEATFKQMDTAGTEYECFQALQRQEQLAASNRINSIWEDVQKQKELEK
TLQNRYGDLLVEKERIYNLMEKYRQEAKIQEEMAEKQRMLQLAEAEAAAANEEETKMAEA
ESEPQVEEANQVADTSETAKVNDESSNEQRDVPSEAAQSTNNQQTTDHQELEEPMAVEPS
HDSSTQINASEVSSQPTVEGHVDHPAIESNSVAADATQTVEGQVDHPAIESNSVAADATQ
TVESNSETIEPKNPIVDES
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgaggattatgataaagggaggtgtttggaagaacaccgaggatgagatcctcaaggct
gctgttatgaagtatggtaagaaccaatgggctcgtatctcttccttacttgttcgcaaa
tcggctaaacagtgtaaagctcggtggtacgagtggctcgatccttctattaaaaagact
gagtggaccagagaagaagatgagaagctgcttcatcttgctaagctaatgcctactcaa
tggagaacaattgctccaattgtgggccgtactccgtctcagtgccttgagcgttatgaa
aaactccttgatgcagcttgtgcaaaggatgaaaattatgaacctggtgatgatccacgg
aaattgcgtcctggagagattgatccaaacccagaatcaaagcctgctcggccagatcct
gttgatatggatgaagatgaaaaagaaatgctttcagaagcacgggctcgtttagcaaat
accagaggcaaaaaggcaaaaaggaaggcccgggagaagcagcttgaagaggctagaagg
cttgcttctttgcagaagaggagagaacttaaggcagctggaattgataataggcatagg
aagaggaaaaggaaggggattgactacaatgctgagatcccttttgaaaagaggcctcct
cctggcttttatgatgtgactgatgaaagttcaatagttgaacagcctaaattcccaacc
accattgaggaactggaaggtgaaagaagggctgataaggaggcccgattgagaaagcaa
gacattgcaaagaacaaaattgcacaaagacaggatgctccatcggctatacttcaagcc
aacaagatgaatgatccagagaccgttagaaaaaggccaaaaatgaatctccccacacca
caaattccagattatgaattagagcatattgcaaaattcggccttccagctttgactgac
gaactctcagaaggaagtggtgccactcgtgctctccttgctgattatacccaaacacct
cgtcaaggaatgaccccattaagaaccccacagagaactccagcagggaagcaagatgct
attatgatggaggcagagaatcaggccaggttacgactatctcagacaccattacttgga
ggtgaaaatccagatttgcacccttcagatttttcaggtgtcactcctaagaaaaaggat
attcaaacaccaaaccccatgttgacaccatcggcaactcctggtggcgtgagtcttact
cccagaataggaatgacaccttcaagagatggccatgcttttggtgtcactcccaaagga
actcccataagggatgagctacacattaatgaagagatggaaatgcatgatagtgctaaa
cttgagctccggaggcaagctgatatgagaaggaatttgcgttccggtttgactggtctt
ccacagcccaaaaatgagtatcagatagttgttcaaccagctccagaagataatgaagaa
caagaggcgaagatagaagaggatatgtctgacaggatggctagggagaaggctgaagaa
gaagctaggcaacaggcattacttaaaaaaaggtcaaaagtactgcaaagggagctccct
aggcctcctgttggctcgttggacctgataaagaactctttaataagagctgatgaagac
aagagctctttcgttcctcctactttgatcgaacaggctgatgagatgataagaaaggag
cttttgtccttgctggaacatgataatgtgaagtatcctcttgatgagaagctggagaag
gataaaaagaaaggaagcaagcgtgctggtggaaaatctgtttccatccctgccatagaa
gaatttgatgaggatgaactgaaagaggctgatcaaatgattaaagaagaggcaaaattc
ttgtgcgaggctatgggccataaggacgaggatcttgatgaatttattgaagcacaccgg
acatgcttaaatgacattatgtacttccccacccgcaacgggtatggtctctctagcgtt
gctggaaacatggagaagcttgctgcattccaggaggaatttgagaatgtgaaaaagaga
atggacgatgatacaaggaaagcacaacgtcttgagcaaaagataaagcttcttacaaac
ggctatcagatgcgagctgcaaaaatatggtcacaagtagaggcgaccttcaagcagatg
gacacagctggaacagagtatgagtgctttcaagcattacaaagacaagaacagttggca
gcatcaaaccgtattaatagcatctgggaagatgttcaaaagcaaaaagaattagagaaa
accttacagaatcgatatggtgatctgctcgtagagaaagaaaggatctacaatctgatg
gagaagtatagacaagaagcaaaaatacaagaagaaatggcagaaaagcaacgcatgctc
cagctggctgaggccgaggctgcagcagcaaatgaagaagagacaaaaatggccgaagcc
gagtcagagccacaggttgaggaagcaaaccaggttgctgatacgagtgaaacggctaaa
gtgaatgatgaatcttctaatgaacagagggatgtaccatcggaagcagcacaaagtaca
aacaatcagcagacaacagatcatcaggaacttgaggaacctatggcagtcgaaccaagt
catgattcaagcacacaaatcaatgcctcagaagtaagttcacaacccaccgttgaaggt
catgtagaccatcctgccattgaaagcaacagtgtggctgctgatgccactcaaacagtt
gaaggtcaagtagaccatcctgccattgaaagcaacagtgtggctgctgatgccactcaa
acagttgaatcaaattctgaaactattgagcccaaaaacccaattgtagatgagagttaa

DBGET integrated database retrieval system