Cynara cardunculus var. scolymus (artichoke): 112527160
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Entry
112527160 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112527160 isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112527160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112527160
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
112527160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TOR1L1_N
HEAT_MROH2B_C
HEAT_2
HEAT_GCN1
LTN1_E3_ligase_6th
TPR_DNAAF5
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
112527160
NCBI-ProteinID:
XP_024993388
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Position
LG 15:complement(15491467..15507960)
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AA seq
874 aa
AA seq
DB search
MVQHKAQLKKQQKRGVDFKKIKRKIGRKLPPPKNTTNTEVKSKAIILPEQSLVSEKAGLA
VSKKGLTLKELLQQTSHHNAKVRRDALIGIRDIFLKHPTELKMHRLSVIEKLRERMSDED
KLVRETLYQLLKAVIFPGCKEDNQGTFISLMMAYVFNAMTHLTIDVRLMAFKFFDLVVQH
YPMSFSMYAEKIIQHYKEILQKNQFNLHDKGKLKSVLAGLAYCLSLLPCNKTTDNNSSTE
NVVADRRILHALESEVHEDHSSFSVTAKELKDLLPILVGGLQDFIPSVQTMPILEPQSFD
CVLSILKSIDLVVKFFVYGNSKSGQQLKVSQPSDRRDQDVLQKLLKKLFDVFPLNPPHQS
SEKDDNRYFVLNVLVSEIFFCSSDWSAPPSAFLEKFLVFIVDALSEKVCSTVLSGKAFFQ
KHSLPLIPFIPKLIMQVDDTWKSHILQAFTEGFKKCDPESSMKLVCLSAVEEMLFPKDGW
LSPSTSDSGIIDFQITWIREIPLLLILLGDKNPSLSKAVLRLQLQLGQCAIMNSPLLQEL
DSMQYSLREFYSTCHDGNISYGPFMKLARDIQELSVCCLYYFSFLDPSLLQSLAACCLCQ
DLEPFLLFRFLEVLNSAYKAGHIQVVDYISFLITLLARYEVCPESSSVMEKCGKSSSGLF
RSITSAVCSCLSQIGDDHLVFKMLEGAVIDQISNKLPLENTCSLLRTIIALDSKLTKISE
QSVSKLGNVIPGYLIEIVSSLGAEDRGSSKTIRTSRSSYYVWPCFIWFYRSEKLLNDVLN
VMTSFISGNDSPTFDGQNGHAMMDLSSRITAVVRVLLLMQEDVRIWQILSCYKQEIDSLL
QNILRVMSHEGSNLNIEEKHKIQCAYDRLKNITG
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcataaggctcagttgaagaagcagcaaaagcgcggtgtagacttcaaaaaa
ataaagcgaaagattggaaggaaattgccgccaccaaagaatactacgaatactgaagtc
aaatcgaaagcaatcatattgccagaacaaagtctggtatcagagaaggccggtctagct
gtgagcaaaaaaggtttgactttaaaagagctccttcagcagacatctcatcacaatgca
aaagttcgtagagatgcattgataggtatcagggatatcttcctcaaacatccaacagaa
ctaaaaatgcacagactctctgttatagaaaaactgcgtgagcgcatgagtgatgaagac
aaattggttcgcgagacactatatcaacttctaaaggcagtgatatttcctggctgtaaa
gaggataaccagggaacttttatatctttgatgatggcatatgtatttaatgcaatgacg
catttgacaattgatgttcgtttgatggcgttcaaattttttgacttagttgtccagcac
tacccaatgtcattctccatgtatgctgaaaagatcatccaacattacaaagagatattg
cagaagaaccagtttaatttgcatgacaagggaaagcttaagagcgttcttgctggtttg
gcatactgtctctctctgttgccgtgtaataagacaacagataataactcgtcaaccgaa
aatgttgttgctgaccgaagaattttgcacgctcttgagtctgaagtgcatgaagatcat
tctagtttttcagtgactgcaaaggaattgaaggaccttttgcctattttggttggtggt
cttcaggattttatcccctcagttcagacaatgcctattttggaaccacaatcatttgat
tgtgtgctttccatattgaaaagtatagatcttgttgtcaagttttttgtttatgggaac
agcaaaagtggtcaacaactgaaagtctcacaaccttccgacagacgagatcaagatgtg
ctgcagaagttattgaagaagttatttgatgtctttcccttgaacccgccacatcagtca
tcagagaaggacgataataggtattttgtcttgaatgtcctagtttcagagatctttttt
tgctcaagtgattggtcagctcccccatctgcctttttggaaaaattcctggtcttcatt
gtagatgcgttgtctgaaaaggtatgcagcactgtgctttctggcaaagcatttttccag
aagcattcactcccacttattcccttcatccccaaactgatcatgcaagttgatgatacg
tggaaatcacacattcttcaggcttttacagagggtttcaagaagtgtgatccagagtct
tcaatgaaattggtttgtctttcggcagtcgaagaaatgctatttcctaaagacggttgg
ctatccccaagtacaagtgattcaggaattatagactttcagattacctggataagagag
attcctttgttgctaatcctcttgggtgataaaaatccatcgttgtccaaggctgtattg
cgtcttcagcttcaattgggacaatgtgctattatgaactctcctctcttgcaggagctt
gacagcatgcagtactcattgagagaattttacagtacatgtcatgatggaaatatttct
tatggtccttttatgaagcttgctagagatattcaggaactttctgtttgttgcctgtat
tacttctccttcctggacccatctctgcttcaatcgctggctgcttgttgcttgtgccag
gatctggagccatttctcttatttcgcttcttggaagttctgaattctgcctataaggct
ggacacatccaggtcgtggactatattagtttcctcatcactttgctggcacgatatgaa
gtttgtcctgaaagcagttcagtcatggagaaatgcgggaagtcaagctctggattgttt
aggtctatcactagtgctgtttgctcttgtctgtctcaaattggggatgatcatcttgtt
tttaagatgctagagggagcagttattgatcagatttcaaataaactacccctggagaac
acctgttcgttgcttagaacgattattgcacttgattcaaagctcacaaaaatttctgaa
cagagcgtttccaaactaggaaacgtcattccaggatatttgatcgagattgtttctagt
cttggagcagaggatcgtgggtcaagtaagaccatccgaaccagcagaagcagttactat
gtttggccttgttttatttggttctataggagtgaaaaacttttgaatgatgtcttgaat
gtgatgacatctttcatctccggaaatgattcaccaacttttgatggtcaaaatggccat
gctatgatggacctttcaagcaggataactgcagttgttcgtgttctcctgctaatgcag
gaggatgttagaatttggcaaatattatcatgttacaagcaagagattgacagcttactg
cagaacatactcagagtcatgtctcacgaaggatccaacttgaacatcgaagaaaagcac
aaaatacaatgtgcatatgatcggttgaagaacatcactggttga
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