Cynara cardunculus var. scolymus (artichoke): 112527405
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Entry
112527405 CDS
T05604
Name
(RefSeq) endoglucanase 6-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00500
Starch and sucrose metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112527405
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
112527405
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
CBM49
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
112527405
NCBI-ProteinID:
XP_024993808
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Position
LG 15:18001770..18009590
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AA seq
626 aa
AA seq
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MEDFMKLYSMATTLFLLIGLVPLALAGGHNYGQALSKSILFFEAQRSGYLPGSQRVKWRG
NSGLFDGKANGVNLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMASSGELGHAMD
AIKWGTDYLIKAHPQPHVLYGEVGDGNTDHYCWQRPEDMTTSRNAYRIDQNNPGSDLAGE
TAAAMAAASIVFRRYNPAYSRELLTHAYQLFDFADKYRGKYDSSITVAQKYYRSVSGYAD
ELLWGAAWLYKATNNQYYLNYLARNGDALGGTGWAMTEFGWDVKYAGVQTLVAKFLMGGK
ARGHGRVFGKYQEKAEFFMCSCLGKGSHNVQKTPGGLIFRQRWNNLQFVTSASFLLTVYA
DYLTSARRNLHCSSGTVTPPKLLAFAKSQVDYILGDNPRATSYMVGYGNNYPQQVHHRGS
SIVSIKVNPSFVSCRGGYATWYSRKARDPNLLTGAIVGGPDAYDNFADERGNFQQTEPAT
YNNAPLLGVLARLHAGHGGYNQLLPVEIPFRKPTAAQIKPTPEAKVTPSAGLIAIAQKTS
SSWVANGKTYYRYSVTVNNKSNKTIKNLNLSVTKLYGPLWGLTKQAGGSYGFPAWVSSLP
AGKSIEFVYIHTNSPAKVSVMSYKLV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttcatgaaactctattcaatggcaactactctgtttctgcttatagggctt
gtacctttggctttagcaggtggacataactatggccaagctctcagcaaaagcattctc
ttctttgaagctcaaagatctggttatctccctggtagccaaagagtcaaatggagaggg
aattctggtctttttgatggcaaagcaaatggggtgaatcttgtaggtgggtactatgat
gcaggggataatgtgaagtttgggttgccaatggcgtttacagtgacaatgatgtcttgg
agcataatagaatatgggaagcaaatggcttcaagtggtgaacttggtcatgccatggat
gctatcaaatggggcactgattacctcattaaagctcaccctcaaccccatgttctttat
ggagaggttggagatggtaatactgaccactattgttggcaaaggcctgaggatatgacc
acttcaagaaatgcttatagaattgaccaaaataaccctggttcggacctcgcaggagaa
accgctgctgccatggccgccgcctccatcgtcttccgccgctacaaccctgcttactcc
agagagctcctcacccatgcctaccagctcttcgattttgcggacaaatacaggggcaaa
tatgacagtagcatcactgtggcccagaagtactaccgatctgtcagtggatacgcggat
gaattactgtggggagctgcttggttgtacaaggcaacaaacaatcagtactacttgaac
tacctcgctagaaacggtgatgccctcggtgggaccggttgggccatgaccgagttcggt
tgggatgttaagtatgctggtgttcaaacacttgttgcaaagtttctaatgggcggaaaa
gcccgtggacacggccgggtgttcggaaagtaccaagaaaaggccgagtttttcatgtgt
tcatgccttggcaagggtagtcacaatgttcaaaagactcctggaggcctcattttccgg
caacgatggaacaatttgcagtttgtcacaagtgcatctttcctcctaaccgtctatgcc
gattacttgacttccgcccggagaaacttacattgttcttccggcaccgtcaccccaccc
aagcttctagcatttgccaaatctcaggtggattatattcttggagacaacccaagagca
acaagttatatggttggatatgggaacaactaccctcaacaagtgcaccatagaggttca
tcgattgtatcgattaaggttaacccttcattcgttagctgccgaggtggttatgctaca
tggtatagccgaaaagcacgtgacccgaatctcctaacgggggcgattgttggtgggccc
gatgcgtatgacaatttcgctgacgaaagagggaattttcagcaaaccgagcctgctaca
tataacaatgcccctcttcttggagtcttggctagactacatgctggccatggtggttac
aaccagcttcttccagttgaaattccttttcgtaagcccactgctgctcaaataaagccc
actccagaagctaaagtaaccccatctgcaggtttgattgcaattgcacagaagacttca
agttcatgggtagccaatggaaaaacctactacagatactcggttacagtaaataacaaa
tcaaacaagaccatcaagaaccttaacctttcggtaacaaagctctacggtccgttatgg
ggtctaacaaagcaagccggcggttcctacgggtttccggcatgggttagctctctaccc
gccggaaaaagcatagagtttgtttacattcataccaattctccggcgaaggtctctgtt
atgagctacaaattggtctga
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