Cynara cardunculus var. scolymus (artichoke): 112528547
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Entry
112528547 CDS
T05604
Name
(RefSeq) endoglucanase 5
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00500
Starch and sucrose metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112528547
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
112528547
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
CBM49
Motif
Other DBs
NCBI-GeneID:
112528547
NCBI-ProteinID:
XP_024995339
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Position
LG 15:12548001..12551662
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AA seq
679 aa
AA seq
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MEMGNHKEEVPNTTWEALTFILNVNPTTFLTSSLSIYIIVSIYITLIVPSSSSTPKLINM
VNSRRVFAAFVLALTIIDAAFGFNFNYGDALDKSLLFFEAQRSGKLPGNQRVKWRGDSGL
TDGYQQKVNLVGGYYDAGDHVKFGLPMAYSVTMLSWGAIEYGKSMMDLNQMGHVLNAIKW
GTDYFIKAHSQPNVLWGQVGDGDSDHYCWERAEDMTTPRTAYKLDTEHPGSDLAGETAAA
MAAASLAFRPYNSSYSDLLLVHAKQLFWFADRFRGLFTDSILCAKEFYTSSGYSDELLWA
ATWLYRATKDESYLKYVVDNAATMGGTGWAVKEFSWDNKYAGVQILLSKVLMDGNGGAYT
ATLKQYQAKADYFACACHQKNDGYNAPMTPGGLLYLHNWNNMQYAASAAFLLAVYSDYLS
AAKSVLTCPDGNVQPHELLTFAQSQADYILGKNPKSMSYIVGYGQNYPIHVHHRGASIAS
ISTLHSVVGCVQGFDAWYHRPEANPNIVHGGLVGGPDKNDNFDDDRSNYEQTEPTLSGTA
PLVGLFSKLHSINSNSAVRPSPTEGQTNQNPHPKTAAKPYEKPGMPVEFFHSITDSWTVG
RIAYYRHKVTIKNKSEKPITDLKLAIENLSGSLWGLSPTQNKNIYELPEWIKVIKPGSEC
SFVYVQGGPQAKVSVQSYH
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggggaatcataaggaagaagtaccaaacacgacgtgggaggctctaaccttc
attctcaacgtgaacccgaccacctttcttacatcttctctctctatatatataattgta
tctatatatataacactcatcgttccttcttcttcatccactccaaaactcatcaacatg
gtgaattccagacgggttttcgccgccttcgtcttagctttgaccatcatcgatgcagca
ttcgggttcaacttcaactacggagatgctctcgacaagagcttgttgtttttcgaagca
caaaggtccggcaagttacccgggaaccaacgggtgaaatggcgtggcgattctggtctc
accgatggttaccaacaaaaggtgaacttggttggagggtactatgatgctggtgaccat
gtcaagtttgggctgccaatggcgtatagtgtcacaatgttgtcgtggggcgccatcgag
tacggcaaaagtatgatggatctcaaccagatggggcatgttttgaatgccatcaaatgg
ggtactgattacttcatcaaagctcattctcaacccaatgttctttggggacaggtcggt
gatggggactcggatcactactgttgggagcgagcagaagacatgactacgccaagaact
gcgtataaattggataccgaacatccgggatcagaccttgccggtgaaactgccgctgct
atggccgccgcttcacttgcatttaggccttacaactcttcttactctgatttgctcttg
gtgcatgctaaacagcttttctggttcgctgatcggtttaggggactgttcacagattca
atcctgtgcgccaaagagttctacacatcatctggttactcagatgaacttttgtgggcg
gctacatggttgtaccgagcaaccaaggatgaatcgtacttgaaatacgtggtggataat
gctgccaccatgggtggcactggttgggcggtcaaggaattctcgtgggataacaagtat
gcgggtgtccagattctcctgtcgaaggtgttgatggacggaaatggtggggcatatacc
gccacgttgaaacagtatcaggcgaaagccgactactttgcatgtgcttgccaccaaaag
aacgatggctacaacgcgcctatgactcctgggggcttactctacttgcataactggaac
aacatgcaatacgcagcctcagctgcattcctgcttgccgtctactcagactatctctcg
gcagctaaatcggtcctaacttgtcctgatggcaatgttcaacctcatgaactcctaact
tttgctcaatcccaggcggattatatcctagggaaaaacccaaagtcaatgagttacata
gtcgggtatggtcaaaactacccgattcacgtgcaccataggggtgcttccattgcctcc
atatccaccctccactccgtagtcggttgtgttcaaggttttgatgcatggtaccaccgc
ccagaagcgaacccaaacattgtccatggtggacttgttggtggaccagacaagaacgac
aactttgatgatgatcgttccaattacgaacaaacagagcctacattatcagggactgct
cctcttgtaggacttttctccaagttacatagcatcaattcaaactcagcagtcagacct
tctccaaccgagggccaaaccaatcaaaatccgcaccctaaaacggcagcaaaaccatac
gaaaagcctggaatgccagtcgaattctttcactcgataacagattcgtggacggttggg
agaatcgcctactataggcacaaggtgacaatcaagaataagtcagaaaaaccaatcaca
gatttgaagttggcaattgaaaacttatcagggtctctatggggattatctccaactcaa
aataagaacatatatgagcttccagaatggattaaggtcatcaaacctggttctgagtgc
agttttgtatatgttcaaggtggaccacaagcaaaggtctcagttcaatcctaccactga
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