Cynara cardunculus var. scolymus (artichoke): 112528964
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Entry
112528964 CDS
T05604
Name
(RefSeq) protein CHROMATIN REMODELING 24 isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112528964
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
112528964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
HDA2-3
GCOM2
Motif
Other DBs
NCBI-GeneID:
112528964
NCBI-ProteinID:
XP_024995801
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All DBs
Position
LG 16:18314389..18327009
Genome browser
AA seq
1115 aa
AA seq
DB search
MAEESSKKPMSLNQLHNRFLSASHSKSNAYGFLSEMKNREREEEEDDGPSFNITDFDSPS
EIKTLPKMGDEDKASSAERVDDGENGASHDESDIIDFGSSSSGTGKSLSTVMNEDKLPTA
EQCEISASLGEPASSIVDDLASRNAGGKHQKVKIHGRRRLCKVVARDDEEEDDKFHDVES
DFSAMVSEFDSPSPVKNTGGNLDSGDEIRDILSNLSSRLQCLSIEKRGRPVKQLPSSSNS
VIKEKLDQQKPVETSEFLDVENTSFSVSSNRSDSSAKAIPXSMVGHSAGMMPNGLIKNNV
CPPSRKENVNGEYVKDQVGKVVSTESFVCPRKNEDDDEDDCVVTSGHKFXQKGESRHGKL
SPKSDGSNKXHMLNDETBDSTSGKEIPFSLSNPKFSFXLPSKIANMLYPHQREGLKWLWS
LHCRGKGGILGDDMGXGKTMQICGFLAGLFHSNLIKRVLVVAPKTLLPHWMKELGVVGLS
QKTREYFGTCAKARQYELQYILQDKGVLLTTYDIVRNNVKSLSGDYEDLDEDDVTWDYMI
LDEGHLIKNPSTQRAKSLLAIPCAHRIIISGTPLQNNLXELWALFNFCCPELLGDKKCFK
DKYESAILRGNDKNASDRDKRIGSAVAXDLRTCIQPYFLRRLKSEVFRDDDATNTAKLSK
KNEIIVWLRLSACQRQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDV
LEGXESVLNQEDHGVAERLAMHIADVADRYDIGENHDILSCKISFIVSLLDDLIPKGHNV
LIFSQTRKMLNLIQDTLTARGYKLLRIDGTTKATDRLKIVNDFQEGVGAPXFLLTSQVGG
LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTCGTVEEKIYRKQIY
KGGLFRSATEHKEQIRYFSQQDLRELFSIPKQGFDVSPTQQQLLEEHDCEHKMDPSLKVH
TKFLESLGIAGISHHSLLFSKTAPVPVVQDDELTRIRQSTFVGNSSSRSSHEQNVDASAQ
YAFNPKDVVVQRKNLSPSISRKLTESEIKEQIKRLSYVFANKGMVDRLPDKGEKIQKQMA
ELNAELQKLRMPKGGETETIDLDDVVDDFNRVLNV
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaatcctccaagaagcccatgagtttgaatcaacttcataatcgcttcctc
agcgcttctcattccaaatcaaatgcttacggtttcctatctgaaatgaagaatcgggag
cgggaggaggaggaagacgatggcccttcttttaatatcaccgatttcgattctccttct
gaaataaaaaccctaccaaagatgggggatgaagacaaagcttcctctgcggaacgagtt
gatgatggtgaaaatggtgcctcccatgatgaatccgatattatcgattttggttcatct
tcttctggaacagggaaatccctatcaaccgttatgaatgaagacaaactcccaaccgct
gagcaatgtgaaattagtgcctctcttggtgaacctgcgagttccattgtggatgactta
gcttcccgaaatgcagggggaaagcatcagaaagttaaaattcatggacgacggaggctc
tgcaaagttgtggcaagagatgatgaagaggaagatgacaaatttcatgatgttgaatca
gatttctcagcaatggtttctgaatttgactcacccagtcctgtgaagaatactgggggc
aatcttgatagtggtgatgaaatcagagatattctaagcaatttaagttcaaggcttcag
tgtctatcaattgaaaagagaggacgccccgtcaaacaacttccaagttcttctaattcc
gttattaaagaaaagttggatcaacagaaacctgttgaaacttctgaatttttagatgtt
gaaaatacatcattttctgtctcatctaaccggtctgattcatcggcaaaggcaattccc
kcttctatggttgggcatagtgctggtatgatgccaaacggtcttatmaaaaataatgtc
tgcccaccaagcagaaaagagaatgttaatggtgaatatgtaaaggatcaagtaggaaag
gttgtatctactgaaagttttgtttgtcctcggaaaaatgaggatgacgacgaagacgat
tgtgtrgttacaagtggccacaaatttyttcaaaaaggggagagtaggcatggaaagtta
tctccgaaatctgatggttctaacaagrttcacatgttgaatgatgaaacaracgattct
acttcaggaaaagaaataccattttctcttagtaacccaaaattcagttttayattacct
agtaagattgcaaacatgytataccctcatcagcgtgaaggtttgaagtggctttggtcc
cttcattgtagagggaagggtggtattttgggggatgacatgggcstagggaagaccatg
cagatttgtggctttttggctgggctattccactcaaatttgataaagagggtattggtt
gttgctcccaagacgctattacctcattggatgaaagaactaggcgtggttggtctttcg
caaaagacaagagaatacttcggaacttgtgcaaaagctcgacaatatgagctccagtat
atactccaggataagggtgttcttcttacaacttatgatattgtgcggaataatgtaaaa
tctttatctggagactatgaagacctggatgaggatgatgtgacctgggattacatgatc
cttgatgaggggcatctcataaagaatcctagtacacaaagggctaaaagtttgttggcg
ataccttgtgctcatcgtataatcattagtggcactccactgcaaaataatcttraggaa
ctgtgggctttgttcaacttctgttgtccagagcttttgggtgacaagaaatgttttaag
gacaaatacgagtcagcaatccttcgtggaaatgacaaaaatgcatctgatagagataag
cgcattggttcagctgttgcacakgatttaagaacatgcattcagccctattttcttcga
cgcctaaaaagtgaggtgtttcgtgatgacgatgctacaaatactgccaagctttctaaa
aagaatgagatcattgtgtggttaagattgtctgcttgccagcgycaactatacgaagcc
tttttgaatagtgagattgttctttcagcctttgatggttcacctttggctgctctcacg
atattgaaaaagatatgtgatcatccacttctgttaacaaagagagccgctgaagatgta
ttagaaggaatrgaatcagtgctaaatcaggaggatcatggggttgctgaaagattggca
atgcacatagcagatgtggcwgatagatatgacattggagaaaatcatgacattctctca
tgcaagatctcctttattgtatcattgctggatgatctgattccaaagggtcataatgtt
cttatcttttcccagacccgcaaaatgcttaatcttattcaggatactcttactgccaga
ggctacaagttattgcggatagatggtactaccaaagctaccgacagattaaagatagtc
aacgattttcaagagggtgttggagctccartatttcttttgacttctcaagttggtggt
ctgggacttacccttacgaaggcagatcgtgtcattgtggttgatccagcttggaacccg
agcactgataatcaaagcgttgatcgtgcatatcgtattggacagaagaaggatgttatt
gtgtaccgtttaatgacttgtggtactgtggaagaaaagatatatagaaagcagatatac
aaagggggcttattcagaagtgctacagaacacaaagagcaaattcgctattttagtcaa
caggatcttagggagcttttcagtatccccaaacagggttttgatgtttctccaactcaa
caacagttgcttgaagagcatgattgtgaacacaaaatggatccatctcttaaagtgcac
acaaagtttttggaatctcttggtatagctggtattagtcaccacagtttgctcttctcc
aagacggctccagtgccagttgtacaagatgatgaactaacgaggattaggcaatcaaca
ttcgtgggtaattcgtcttcacgctcctcacatgaacaaaatgtggatgccagtgctcaa
tatgctttcaacccaaaggatgttgttgtgcaaaggaagaatctttctccaagtatttcc
cgcaaactaacagaatcggaaattaaagaacaaatcaaacggctgtcttatgtttttgca
aacaaggggatggttgataggttaccggataagggagaaaagatacaaaaacaaatggca
gagttgaatgcagagctccaaaagcttcgtatgccgaaaggaggtgaaacagaaaccatt
gatttagatgatgtcgttgatgatttcaacagggtgttgaatgtttaa
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