Cynara cardunculus var. scolymus (artichoke): 112529584
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Entry
112529584 CDS
T05604
Name
(RefSeq) endoglucanase 6-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00500
Starch and sucrose metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112529584
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
112529584
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
CBM49
Motif
Other DBs
NCBI-GeneID:
112529584
NCBI-ProteinID:
XP_024996677
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Position
LG 16:2487461..2493105
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AA seq
622 aa
AA seq
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MGIVSMATTLFLLMGVAPLALAGGSHNYGEALSKSILFFEAQRSGYLPGNQRVKWRGNSG
LFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMAWSIMEYGKQMGESGELGHAMDAVK
WGTDYLIKAHPQPHVLYGEVGDGNTDHYCWQRPEDMTTSRNAYRIDQNNPGSDLAGETAA
AMAAASIVFRRSNPAYSRELLTHAYQLFDFADKYRGKYDSSITVAQKYYRSVSGYADELL
WGAAWLYKATGNEYYLDYLGKNGDALGGTGWAMTEFGWDVKYAGVQTLVAKFLMGGKAGN
HAPVFGKYQEKAEFFMCSCLGKSSHNVQKTPGGLIFRQRWNNLQFVTSASFLLTVYSDYL
TSARKSLQCSSGTVAPSELLAFAKSQVDYILGDNPRATSYMVGYGNNFPQQVHHRGSSIV
SVKVNPSFVSCRGGYATWFSRKASDPNLLTGAIVGGPDAYDNFADHRDNYEQTEPATYNN
APLLGILARLHGGHGGYNQLLPVEIPVAKPIAVQPKPTPVKETSSAAPIAIEQKTTTSWV
ANGKTYYRYSVVVANKSSKTIKNLNLSVSKLYGPLWGLTKTTGGSYGFPTWVRSLPAGKT
MEFVYIHTASPAEVSVSSYTLA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcgtttcaatggcaaccactctgtttctgcttatgggtgttgcacctttggct
ttagctggcggcagccataactacggcgaagctttaagcaaaagcattctgttcttcgaa
gctcagagatctggttatcttcctggaaatcaaagagtcaaatggcgaggaaattctggt
ctcttcgatggcaaagccaatggggtggatctggtgggagggtattatgatgcaggggat
aatgtgaaatttgggcttccaatggcgtttacagtgacgatgatggcatggagtataatg
gagtatggaaagcaaatgggtgagagtggtgagcttggtcacgccatggatgctgttaaa
tggggaactgattacctcattaaagctcaccctcaacctcatgttctctatggagaggtc
ggagatggtaacacagaccactattgttggcaaagacccgaagacatgaccacttctcga
aatgcttacagaattgaccaaaataaccctggctccgaccttgctggagaaactgccgct
gctatggctgccgcttctattgtcttccgtcgctctaacccggcttattctcgagagctt
ctcacccacgcgtaccagctattcgattttgccgacaaatacaggggtaaatatgacagt
agcatcaccgtggcccagaaatactaccgctctgtcagtggatacgctgatgaattgcta
tggggagctgcttggttgtacaaggcaacaggcaatgagtactacttggattacctgggt
aaaaatggcgatgctcttggcgggactgggtgggccatgactgagttcggttgggatgtt
aagtatgccggggttcagacccttgtcgctaagtttctaatgggagggaaagcaggaaat
catgctcctgtgttcgggaagtaccaagaaaaggcagaatttttcatgtgttcttgtctt
ggaaagagtagccacaacgtgcagaagactcccggtggtctaattttcaggcaacgatgg
aacaacttgcaatttgtcacgagtgcgtctttcctcctcaccgtgtactccgattacttg
acgtccgcccgaaaaagcctacaatgttcttcgggaactgttgccccctcggagctactt
gcattcgctaagtcacaggtggattacattcttggagacaacccaagagcaacaagttac
atggttggatatggaaacaacttcccacaacaagtgcaccatagaggttcatccattgtt
tcggttaaggttaacccatcgttcgttagttgtagaggtggttatgcaacatggttcagt
aggaaagcaagtgacccgaatcttttgactggtgccattgttggtggacccgatgcctat
gacaatttcgcggaccatagagacaattatgagcaaaccgagcctgctacttataacaac
gctcctcttcttgggatattggctaggctacatggtggtcatggtggctacaaccagctg
cttccggttgaaattcctgttgctaagcctattgctgttcaaccaaagcctaccccagtt
aaagaaacttcatctgcagctccaattgcaattgaacaaaagactacaacttcatgggtg
gccaatgggaaaacatactacagatactcagttgttgtggctaacaaatctagcaagacc
atcaagaacctcaatctatcggtctccaagctctacggtccactatggggtctaaccaag
accacaggcggctcatatgggttcccaacatgggttcgatcattacccgctgggaaaacc
atggagtttgtgtacatccacacggcttcacccgcagaagtttcggtctcgagctacaca
ttggcttaa
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