Caretta caretta (Loggerhead turtle): 125620702
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Entry
125620702 CDS
T09292
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125620702 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125620702 (CNGB1)
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125620702 (CNGB1)
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
125620702
NCBI-ProteinID:
XP_048672708
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Position
12:6036134..6103709
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AA seq
861 aa
AA seq
DB search
MSKQTRDVELDHLVHDQPLDRRSSSPSFQGTVEQLPNVPSYRFSTASHIPVLISKKQKSG
VVNPSFLNEEWSPSHPLEPSSSKYPTVNIKDVDAKSSSAGVQKHDLHLPPPSRNNSHTLT
VPGMPVAPKRYSLESPTVEYTGATHLEECQLRNRRKLRSQEDSIEDLIVPSPAKSLVRAS
PGRSNLQRKDLPKRVGSATSQNSSTINDRLQELVRLFKDRTEKVKEKLIDPDTTSDDETP
VASPSRKTSPEPLPPPERKEAEAEVEEHYCEMLCCKFRCRPCLSHVRKYRFPSSIDPLTN
LMYVLWLFFVVLAWNWNCWLIPVRWAFPYQMPENLHWWLLADYLCDLIYFLDITVFQVRL
QFVQGGDIITDKKAMRQNYLKSRRFKMDVFCLLPLDFFYFKVGVNSLLRLPRCFKYMAFF
EFNDRLEAILSKAYVYRVIRTTAYLLFSLHVNSCLYYWASSYQGLGSTIWVYNGEGNSYI
RCYYWAVKTLITIGGLPDPQTLFEILFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYY
RSCMDSTIKYMNFYKIPKSVQNRVKTWYEYTWHSQGMLDESELMGQLPDKMRLDIAIDVN
YDIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGP
DGKTVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHGFTNLFILEKKDLNEILVHYPESQ
KLLRKKARKMLKNNNKPKEEKGMPKDALIIPPRPGTPKLFQAALVAAGKIGGKGKLAHIR
WKLRELKAMQAMQEPKSTPVLLKLPVRHHSFKAPCRSSDHTEEEEIVSKSSDNSVFIRLS
PAPQSNEQILSVEVSEKEEKK
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaaaccagagacgttgagttagatcacctggtgcatgaccagccgcttgac
cgcaggagctcctccccttccttccaaggcacagtagagcagctacccaatgttcccagc
taccgattctccaccgcctcccacatcccagtcctcatctccaaaaagcaaaagtctggt
gtggtgaaccccagttttttgaatgaggaatggtccccttctcatcctttagagccatca
tccagtaaatatcccactgtaaacatcaaggatgtcgacgccaaaagcagctctgcaggg
gtgcaaaaacacgacctccatctgcccccgccctcccggaataattcccacactctcacg
gtaccaggcatgcctgtggctccgaagagatatagcttggagtcacctactgtggaatac
accggagcaacacatctcgaagaatgccagttacggaacaggaggaagctacgctcccag
gaggacagcatagaggatttaattgtgccatccccagctaagtctctagtcagagcctca
cctggccggtccaacctacagagaaaagacttgccaaagcgagtaggttcagcaacaagc
cagaacagttcaacaatcaatgaccggctgcaggagctggtgaggctctttaaagacagg
actgagaaagtgaaagagaaactgattgacccagatactacctctgatgatgagaccccg
gtggcatccccttccaggaaaacctctccagaaccactaccaccaccagaacgaaaagag
gcagaagctgaagtggaggaacattactgtgagatgctgtgctgcaaattcagatgccgc
ccctgtttgagccatgtgagaaagtaccggttcccgagcagcatagaccctctcaccaat
ttgatgtatgtcctgtggctgttctttgttgttctggcctggaattggaactgctggctg
attccagtacgctgggcctttccataccagatgcctgaaaacctccattggtggctactt
gcagactatctctgcgacctcatctactttctggacatcactgtctttcaggtccgcctg
cagtttgtccaaggaggagacataatcactgataaaaaggccatgcgacagaactacctg
aaatcccgacgcttcaagatggacgtgttctgccttcttcccctggatttcttttacttc
aaagttggcgtaaattctctcttgcggttgcctcgctgttttaagtacatggccttcttt
gagtttaatgaccggcttgaagctatcctgagcaaggcatatgtctacagagtgataagg
accacagcctatttactcttcagcttacacgtgaactcatgcctgtattactgggcatca
tcgtaccagggactgggttctaccatatgggtctataacggggagggaaacagttatatc
cgctgctattactgggctgtcaagacgctaattactattggaggactgcctgaccctcaa
actctgtttgagatactcttccagcttctgaactacttcacaggggtctttgctttctct
gtcatgatcggccaaatgagagatgtagttggtgctgctactgcaggacaaacttattat
cggagttgcatggacagtaccattaaatacatgaatttctacaaaatccccaaatctgtt
cagaatcgggtcaaaacctggtatgaatacacttggcattcacaaggcatgttagacgaa
tcggagctgatggggcagctgccagacaagatgaggctggatattgctattgatgtcaac
tacgacatagtcagcaaggtggcgctctttcagggctgtgacaggcagatgattttcgac
atgttgaagaggctccgatctgttgtttacttacctaatgattatgtgtgtaagaagggg
gaaattggccgagagatgtacattatacaagctggacaggtgcaggtgcttggaggacct
gatggcaaaactgtgcttgtgactctgaaagctggatctgtgtttggagaaataagcttg
ttggcagtgggaggtggaaatcgtcgcacagcaaatgttgtggctcatggatttactaac
cttttcatcttggagaagaaggacttgaatgaaattttggtgcattatccagaatctcag
aagctgctgcgtaagaaggcgaggaaaatgctgaaaaataacaataaacccaaagaagaa
aaaggcatgccaaaagatgcgcttatcattcctccaagacctgggacacctaaactcttt
caagctgccctcgtagctgcaggaaagattggaggcaaaggaaagcttgcccatatcaga
tggaaattgagagagctgaaagcaatgcaagctatgcaggagcccaaatccactccagtt
ctgctgaaattaccagtccgccatcattcatttaaagcaccctgcagatcaagtgaccac
actgaggaggaggagatcgtctcaaaatcttcagataattcagtctttattcgcttgagt
cctgccccacaaagtaacgaacagattctttctgtggaggtttcagaaaaggaagaaaag
aaatga
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