Caretta caretta (Loggerhead turtle): 125627419
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Entry
125627419 CDS
T09292
Symbol
CACNA1A
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent P/Q-type calcium channel subunit alpha-1A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
ccay04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125627419 (CACNA1A)
04020 Calcium signaling pathway
125627419 (CACNA1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125627419 (CACNA1A)
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125627419 (CACNA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125627419
NCBI-ProteinID:
XP_048687465
LinkDB
All DBs
Position
26:complement(10567741..10720736)
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AA seq
2474 aa
AA seq
DB search
MARFGDEVPARYGAGGSGGAGSGGAAGGGGGRGAGGSRQGGPPGAQRMYKQSMAQRARTM
ALYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQ
HLPDEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLT
GILAKVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILI
FAIIGLEFYMGKFHTTCFDLVTGEIKVDVPCGTEEPARMCPNGTECREYWEGPNYGITQF
DNILFAVLTVFQCITMEGWTELLYYSNDASGNTWNWVYFIPLIIIGSFFMLNLVLGVLSG
EFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDETEEEQRLPFDALR
RATIKKSKTDLLNPEEADDQLADISSVGSPFARASIKSAKLENSTFFHKRERRMRFYIRR
MVKTQAFYWTVLSLVALNTLCVAIVHYSQPDWLSDFLYYAEFIFLGLFMSEMFIKMYGLG
TRPYFHSSFNCFDCAVIIGSIFEVIWAVMKPGTSFGISVLRALRLLRIFKITKYWASLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPSTNFDTFPAAIMTVF
QILTGEDWNMVMYDGIKSQGGVHQGMVYSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEQEEEEVANQKLALQKAKEVAEVSPLSAASMSIAVKEQQKNQKSSKSVWEQRTSEM
RKHNLLASREALYNEMDPEDQWKVTYARAMRPDIKTHLDRPLVVDPQENRNNNTNKTRPS
EPSMEQRFSQQRAEDFLRKQARYHERSREFSSSRSYEQPDAEGLEARRQRGGSKEADLNQ
DGTYRDLDYPSQAQESSQEQGYRDSASERIRAVDPHRRHQRCQGGSKESRSGSPRLAEGE
RDHRRHRAHRRIGEEGGGAGEGSKVERRLRHREGSRPSCGNVEGEQPDGERRRRHRHAAQ
STYDTGGKRDDRERRHRRRKENQGPSPVPGPNLSTTRPIQQDMGRHEPQVAEDIDNMKNN
KLATTEPSIPHNTSHLQSPAKVGHHANCMAIRASHNLPGTLGQPPPSSQNAANRQAPSNL
PQPGPPKTPENSLIVTNPSTQNNPAKAAKKPEHTTVDIPATFTPPINNTVVQVNKNANPD
PLPKKEDEKKEEEDGEQEENGPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILMV
IAMSSIALAAEDPVQPNATRNNVLRYFDYVFTGVFTFEMVIKMVDLGLVLHQGAYFRDLW
NILDFIVVSGALVAFAFTGSSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNS
LKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFEKDCRGEYLVYEKDNEVKAQ
KREWRKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYV
VYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNK
QSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFDKASTAYEDVLKMFNHVFTSLFSLE
CLLKIMAFGVLNYFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRATRLIKLL
RQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIEDEEEDSAITEHN
NFRTFFQALMLLFRSATGEAWHEIMLSCLSGKPCDENSGIKEHECGNEFAYFYFVSFIFF
CSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRMTFTDMYEMLR
HMSPPLGLGKKCPPRVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQ
QMDAELRKEMMAIWPNLSHKNLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAM
REEQNRTPLMFQRMEPPSPTQEGVPGPNALPSSHLDQGGGLSAPEGGIKESQSWVTERAQ
EMFQKTGTWSPERGRPEDMPNSRPNSQSVEMREIGKDGYSDSDHYLPMEGHGRAASMPRL
PAENQRRKVRPRGNNLSTITDTSPMKRSASMLGHSRSKGIRLDDYSLERVVPEENQRHHE
RRREWSHRASERSLSRYADGGTGLGTDLSMTTPSGDLPPKERDQERGRPKDRKHHHHHHH
HRHPHPSSDKERYSQERHEHSRPRSRDRRWSRSPSEGREHMPHRQGSSPVSGSPVLSTSG
TSTPRRGRRQLPQTPPTPRPHVSYSPVVRKVISAGPQQQPQSVHHPSRISTPAPRRYPSL
PADPQVAERPGRSPAMERHTVPPRNDSPRAYRHASSRWSVPHVSEPHPGPRRGGYYRSPD
CAAPPSKEAFSYETTHVSSSGRSPRTSRAGGGSSPSRPGRRLPNGYYHSHGAAKPRSRQG
LHEPSSETDEDDCC
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggagacgaggtgccggcccgctacggggctggcggctccgggggcgct
ggctccgggggcgcggcgggcggtggaggcggccggggtgcagggggcagccggcagggc
ggaccgcccggggcccagaggatgtacaagcagtcgatggcccagcgagcccgcaccatg
gctctctacaaccccatccccgtccggcagaactgcctgactgtcaaccggtccctgttc
ctcttcagcgaggacaatgtggtgaggaaatacgccaaaaagatcaccgaatggcctcct
tttgaatacatgattttagctactatcatagcaaactgcattgttcttgctctggagcag
cacctgcctgatgaagacaagaccccgatgtcagaacgactggatgacacagaaccatat
ttcatcggaatcttttgtttcgaggctggaattaaaatcatcgccttagggtttgctttc
cacaaaggctcctatctgaggaatggatggaatgtgatggacttcgtggtggttctcaca
ggcatcttggcaaaagtcggctctgacttcgacctgcgaacgctgcgggcagttcgtgtg
ctccggccactaaagctggtgtcggggattccaagtttacaagttgttctgaagtccatc
atgaaggctatgatacctctgctacaaattggcctactcttgttttttgcaatccttatt
tttgcaatcataggattagaattttatatgggaaaatttcacaccacctgctttgacttg
gtgacaggcgaaatcaaggtcgatgttccatgtgggacagaagaaccagcccgcatgtgc
cccaatgggacagaatgccgtgagtactgggaaggcccgaattacgggatcacgcagttc
gataacatcctgtttgctgtgctgactgtcttccagtgtatcaccatggaagggtggacc
gaactcctttattatagcaacgatgcctcagggaacacttggaactgggtgtacttcatc
cccctcatcatcattggctccttttttatgctgaaccttgtgctgggggtgctgtctggg
gagtttgccaaggaaagagagcgggtggagaaccggcgggcgtttctcaagttgagacgg
cagcagcagattgagagggagctcaacggctacatggagtggatctccaaagcggaagaa
gtgatcctagcggaggatgagacggaggaagagcagaggctcccgtttgatgctctgcgg
agagccaccatcaagaaaagcaagacagacctgctgaacccggaggaggcagatgatcag
ctggccgacatctcctcagtgggttcaccctttgctcgagccagcatcaaaagtgccaag
ctggaaaactccaccttttttcacaaaagggagaggaggatgcgtttctatatccgccga
atggtcaaaactcaggccttttactggacagtcctcagtctggtagcactcaacaccttg
tgtgttgctatagtacactacagccagccagattggctatccgacttcctctactatgca
gaattcattttcttaggactctttatgtccgaaatgtttataaaaatgtacgggctcgga
acgcggccttacttccactcctccttcaactgcttcgactgcgccgttatcatagggagc
atctttgaggtgatctgggctgtcatgaagcctggaacatcctttggaatcagcgtgtta
cgagctctcaggttattgcgtattttcaaaatcacaaagtactgggcttccctacggaac
ctggtggtgtctctcctgaactccatgaagtccatcatcagcttgctgttccttctcttc
ctcttcatcgtcgtctttgcccttttggggatgcagctctttgggggccagttcaatttt
gacgacgggaccccttccaccaactttgacactttcccagcagcaataatgacagtattt
cagatcttgactggcgaagactggaacatggtaatgtacgatggtatcaaatctcagggc
ggagtccatcaggggatggtgtactcggtctatttcattgttctgaccttgtttggtaac
tataccctgctgaacgtgtttttggctatcgccgtggataacctggctaacgcacaggag
ctcaccaaggatgaacaagaagaggaggaggtggccaaccaaaaacttgcactacagaaa
gccaaggaggtggcggaagtgagccccctgtctgcagccagcatgtctatagcggtgaaa
gagcagcagaagaaccaaaaatcctccaagtctgtctgggaacagagaacgagcgagatg
cggaagcacaatctgctggcgagccgggaagccctgtacaatgagatggaccccgaggac
cagtggaaggtgacctatgcccgggccatgcggcctgacatcaagacccacctggaccgg
ccgctggtggttgacccccaggagaatcgcaacaacaacaccaacaagacccggcccagc
gagccctccatggagcagcgcttcagccagcagcgggccgaggatttcctgcgcaagcag
gcccgttaccacgagcgctcgcgggagtttagcagctcccgcagctacgagcagcctgat
gcagagggtcttgaggcccgacggcagcgcggcgggagcaaggaggctgatctgaaccag
gacggcacctaccgggacctggactatcccagccaggctcaggagagcagccaggagcag
ggttaccgcgacagcgcctcggagcggatcagagctgtcgacccccaccgcaggcaccag
cgctgtcaagggggcagcaaagagagccgcagcgggtcgccccggctggccgagggcgag
cgggatcatcggcggcaccgggctcaccgccggattggagaggagggcggcggggcaggg
gagggcagcaaggtggagcggcgactgcggcaccgggaagggagccggccctcctgcggg
aacgtggagggtgagcagcccgacggggagagacgtcggcgccaccggcatgccgcgcag
tccacctatgacaccggcggcaagagggacgacagggagaggcggcaccggcgcaggaaa
gagaaccaaggccccagcccagtgcccggcccgaacctctccaccacgcggccgatccag
caggacatggggcgccacgagccacaggtggcggaggacatagacaacatgaagaacaac
aaactagccaccacggagccctcgatcccccacaataccagccacctccagagcccagcc
aaggtgggccaccatgccaactgcatggccatccgggcatcccacaaccttcctggcacc
ctgggccagccgccccccagctcccagaatgctgccaaccgccaggcacccagcaacctg
ccccagccagggcccccgaaaacccccgagaacagccttatagtcaccaaccccagcacc
cagaacaacccagccaaggctgccaagaagcccgagcacaccacagtggatatcccagcc
accttcacaccacccatcaacaacaccgtcgtgcaagtgaataaaaatgccaatccagac
ccactgccaaagaaggaggacgagaagaaagaggaggaggatggcgagcaggaggagaat
gggcccaagcccatggttccctacagctccatgttcatcctctccaccaccaatccgttc
cgcaggctctgccattacatcgtgaacctgcgctactttgagatgtgcatcctgatggtg
atcgccatgagcagcatcgcgctggccgctgaggaccccgtgcagcccaatgctacccgg
aacaacgttctgcgctattttgactatgtcttcacgggcgtcttcacctttgagatggtc
attaagatggtcgacctggggctggtccttcaccaaggcgcctatttccgggacctgtgg
aacatcctggatttcatcgtggtcagcggagcactggtggcctttgccttcacaggcagc
agcaaagggaaggacattaacaccatcaaatcactgcgtgtcctccgtgtcctcaggccc
ctgaaaaccatcaagcgattgccaaagctcaaggctgtctttgactgtgtggtgaactct
ctcaaaaacgtcctcaacatcctcatcgtctacatgctcttcatgttcatcttcgctgtg
gtggccgtccagctcttcaagggcaagttcttctactgcacggatgagtccaaggagttt
gagaaggactgtaggggcgagtacctggtctacgagaaggacaacgaagtgaaagcccag
aagcgggagtggaggaaatacgagttccactatgataacgtgctgtgggcactcctgact
ctcttcactgtgtccacgggggaaggctggccacaagtcctcaaacactcggtggatgcc
acctatgagaaccagggccccagccccggctatcgtatggagatgtccatcttctacgtt
gtctacttcgtggtcttcccatttttcttcgtgaacatttttgtggccttgatcatcatc
acgttccaggaacagggagataagatgatggaggaatacagcctggagaagaacgagaga
gcctgcatcgactttgccatcagtgccaagcccctgacccggcacatgcctcagaacaag
cagagctttcagtaccgcatgtggcagttcgtggtgtcgccgcccttcgagtacaccatc
atggccatgatcgccctcaacaccattgtcttaatgatgaagttcgataaggcctcaact
gcttatgaggacgtgctaaagatgttcaaccacgtcttcacttcattattttccctggag
tgtctgctgaagatcatggcctttggagtgctgaattatttccgtgatgcctggaatatc
tttgattttgtcacagttctgggtagcatcacagacatcttagtgacagagtttgggaac
aacttcatcaacctgagcttcctgcggctcttccgtgctacccgcctcatcaagctcctt
cgccagggctacaccatccgcatcctgctgtggaccttcgtccagtccttcaaggccctt
ccctatgtctgtctgctgattgccatgctcttcttcatctacgccatcatcggcatgcag
gtgttcggtaacattggcatcgaagacgaagaggaggactcggctatcacagagcacaac
aacttccgcactttcttccaggccctcatgcttctgttcaggagtgccaccggcgaggcg
tggcacgagatcatgctgtcgtgtctgagcgggaagccctgcgacgagaactcggggatc
aaggagcatgagtgtggcaacgagttcgcctatttttattttgtctccttcattttcttc
tgctccttcctgatgctgaacctgtttgtggccgtcatcatggacaactttgagtacctg
acccgagactcctccatcctggggccccaccatctggacgagtacgtgcgtgtgtgggca
gagtacgaccctgctgcttggggccggatgactttcacggatatgtatgagatgctgagg
catatgtctccaccccttgggttagggaagaaatgcccaccccgggttgcttataagagg
ctgctccgcatggacctgcccgtggctgacgacaacaccgtccacttcaactcaaccctc
atggctctgatcaggaccgcactggacatcaagatcgccaaaggaggagccgacaagcag
cagatggatgccgagctccggaaggagatgatggccatctggcccaacctctcccacaag
aacctggatctccttgtcacccctcacaaatccacggacctgacagttgggaagatctac
gccgctatgatgatcatggagtactaccggcaaagcaaggccaagaagctccaggccatg
agggaggagcagaatcgaacgccgctcatgttccagcgtatggagccgccgtcgcccacc
caggagggggtcccggggccgaacgctctcccgtcctcccatctggaccaagggggtggc
ctgagtgcgcctgaagggggcatcaaggagagccagtcctgggtcaccgagcgggcacag
gagatgttccagaagacaggcacctggagtccagagcgaggtcgccccgaagacatgccc
aacagccgtcccaattcccagtctgtggagatgagagaaattgggaaggacggctactca
gacagcgaccactacctccccatggaagggcacggccgggctgcctccatgccacgactc
cctgctgaaaaccagaggaggaaggtgcgaccccgaggaaataatctcagtacgatcacg
gacaccagccccatgaagcgctcggcttccatgctgggccactcgcgctccaaaggcatc
cggctggacgactactccttggagagggtcgttcccgaggagaaccagcggcatcatgag
cggcggagggagtggagccaccgggcctcggagcgctcgctcagccgctacgcggacggg
ggcacagggctgggcacggacctgagcatgaccacgccatcgggcgacctacctcccaaa
gaaagagaccaggagcgaggacggcccaaggaccggaagcatcaccaccatcaccaccat
caccggcatccccacccctcctccgacaaggagcgctattcgcaggagagacacgagcac
agccggccccgctccagagacaggcgctggtccagatcccccagcgagggccgtgagcac
atgccccacaggcagggcagtagtcccgtaagtggcagtccagtcctttcaacatccggc
accagtaccccaaggcgaggacgccgccagctcccacagacccctccgacaccccggcca
cacgtgtcctattcccctgtggtccgtaaggtcatcagtgcaggcccccagcagcagccg
cagtcagtgcatcaccccagcaggatatccacccccgcgccgagacgatacccctcgctc
cccgccgacccccaggtggcggagcggcccggcagatcgcccgccatggagagacacacg
gtcccgccgcggaacgattcgccccgagcctaccgccacgccagcagccggtggtcggta
ccccatgtctccgagccgcacccgggaccccgtcgtggcggttattaccggagtccggac
tgcgccgcaccccccagcaaggaagccttctcctacgagaccacgcacgtcagcagctca
gggcgttcgcccaggacttcccgggcgggaggcggctcttcaccctccaggcctgggcgg
cgacttcctaacggatattaccactcccatggagcagccaagccacgctcccgccaagga
ctgcatgaaccctctagcgaaactgacgaagatgactgctgctaa
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integrated database retrieval system
