KEGG   Caretta caretta (Loggerhead turtle): 125628302
Entry
125628302         CDS       T09292                                 
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F-like
  KO
K04853  voltage-dependent calcium channel L type alpha-1F
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04010  MAPK signaling pathway
ccay04020  Calcium signaling pathway
ccay04260  Cardiac muscle contraction
ccay04261  Adrenergic signaling in cardiomyocytes
ccay04270  Vascular smooth muscle contraction
ccay04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    125628302
   04020 Calcium signaling pathway
    125628302
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    125628302
  09153 Circulatory system
   04260 Cardiac muscle contraction
    125628302
   04261 Adrenergic signaling in cardiomyocytes
    125628302
   04270 Vascular smooth muscle contraction
    125628302
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ccay04040]
    125628302
Ion channels [BR:ccay04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   125628302
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel HemY_N
Other DBs
NCBI-GeneID: 125628302
NCBI-ProteinID: XP_048689207
LinkDB
Position
27:830709..876379
AA seq 1613 aa
MTIFANCVALGVYIPFPEDDSNTANHDLEQVEYVFLIIFTVETFLKIIAYGLVLHPSAYI
RNGWNLLDFVIVVVGLFSVILEQASHKPGDAHHMSGKPGGFDVKALRAFRVLRPLRLVSG
VPSLHIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFLVGSDLEAEED
PSPCAFSGHGRECPLNNTECRGRWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWM
QDAMGHELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEE
DLRGYLDWITQAEDIDPDDEEGDPEDKHSRVTVEDLAEKKKGRLRWLRHSGHSTDTHTSL
PASETTSINTENVGEEEHHTACCAVYLGKISKTKFCRRCRRTKRLLRKRCRLAVKSVSFY
WTVLILVFLNTLTIASEHYSQPDWLTQIQAYANKGLLSLFTLEMLLKLYSLGLPAYFASF
FNRFDCFVVCGGILETLLVELRVMEPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNS
MKSIASLLLLLFLFIIIFALLGMQLFGGKFNFDETQTKRSTFDTFPQALLTVFQILTGED
WNAVMYDGIMAYGGPYFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLADGDNINSSAE
ESKKGKLADEAPGSGSQDGSVKVPCMEEEKEEDEEGSEEGGEEAEEGDQESLAESHLDKL
EEAPTEKVLPIPAGSAFFILSSTNPLRVGCHAVIHHHIFTNLILVFIILSSISLAAEDPI
RAHSFRNIILGYFDYAFTSIFTVEILLKMTAYGAFLHKGSFCRNWFNLLDLLVVSVSLIS
FGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMF
ACIGVQLFKGKFYSCTDEAKHTPEECKGTFIVYKDGDVGHPMVRERVWHNSDFNFDNVLS
GMMALFTVSTFEGWPSLLYKAIDANGENQGPIYNYRVEISVFFIVYIIIIAFFMMNIFVG
FVIITFRAQGEQEYRNCELDKNQRQCVEYALKAQPLRRYIPKNRHQHRVWAAVNCSAFEY
GMFLLILLNTIALAVQHYEQSQPFNYVMDLLNMVFTGLFTVEMVLKIIAFKPRHYFCDAW
NTFDALIVVGSVVDIAVTEVNSSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFI
KSFQALPYVALLIAMIFFIYAVIGMQTFGKVAMQDGTQINRNNNFQTFPQAVLLLFRCAT
GEAWQEIMLASLPGKRCDPESDVGPGEEFTCGSHFAIVYFISFFMLCAFLIINLFVAVIM
DNFDYLTRDWSILGPHHLDEFKRIWSEYDPTAKGRIKHLDVVTLLRRIQPPLGFGKLCPH
RVACKRLVAMNMPLNADGTVTFNATLFALVRTSLKIKTEGNLDQANKELRAVIKKIWKRT
KPKLLDEVIPPPEEEEVTVGKFYATFLIQDYFRKFRKRKEKGLLGPDASPSNSTALQAGL
QTLQDLGPEMRRALSCDLEDGEEVAGETLCEEEQLTCQTPEGLLGSSPDHRPTAPVSAQA
ERGGETLANGLLGSRRPSSASLVRTPNGLHSYEENEGGRRSCPSYPTSPAGAA
NT seq 4842 nt   +upstreamnt  +downstreamnt
atgaccatcttcgccaactgcgtggccctgggggtctacatccccttccccgaggacgac
tccaacaccgccaaccacgacctggagcaggtggagtacgtcttcctcatcatcttcacg
gtggagacgttcctgaagatcatcgcgtacgggctggttctgcaccccagtgcctatatc
cgcaatggctggaacctgctggacttcgtcatcgtggtggtggggttgttcagcgtgatc
ttggagcaagcgtcccacaagcccggggacgcccaccacatgagcggcaaaccggggggc
ttcgacgtcaaagccctgagggccttccgcgtgctccgccccttgcgcctcgtctccggc
gtccccagtctgcacattgtgctcaactccatcatgaaggccatggtgcccctgctgcac
atcgcgctgctcgtcctcttcgtcatcatcatctacgccatcatcggcctggagctcttc
atcggccgcatgcacaagacctgcttcctcgtcggctcagacctggaggccgaggaggac
ccctcgccctgcgccttttcggggcacggccgggagtgtcccctcaacaacaccgagtgc
cggggccgctgggaggggcccaatggcgggatcaccaacttcgacaacttcttcttcgcc
atgctcaccgtcttccagtgcatcaccatggagggctggaccgacgtgctctactggatg
caggatgctatggggcacgagctgccctgggtttacttcgtcagcctggtcatcttcggc
tccttcttcgtcctcaaccttgtgctgggggtgctgagcggggagttctccaaggagcgg
gagaaggccaaagcgcggggcgacttccagaagctgcgggagaagcagcagatggaggag
gatctcaggggctacctggactggatcacacaggccgaggacatcgaccccgacgacgag
gagggggacccggaggacaagcactcccgtgtgaccgtggaagacctggcggagaagaag
aaaggccgactccggtggctccgtcactcaggccattccaccgacacccacaccagtctc
cccgcgagtgaaacgacttccatcaacaccgagaacgtgggcgaagaggagcatcacacc
gcctgctgcgccgtgtatctaggcaaaatctcaaagacaaaattctgccgccgctgccgg
cgcacgaagcggctgctgcggaagagatgccgcctggcggtgaaatccgtctccttctac
tggacggtcctgatcctcgtcttcctcaacacgctgaccatcgcctccgagcactacagc
cagccggactggctgacccagatccaggcctacgccaacaaggggctgctgtcgctcttc
acgctggagatgctgctgaagctgtacagcctgggcctgccggcctatttcgccagcttc
ttcaaccgcttcgactgcttcgtggtgtgcgggggcatcctggagaccctgctggtggag
ctgcgggtcatggagccgctcggcatctccgtgctccgctgcgtccgcttgctgcgcatc
ttcaaagtcaccaggcactgggcgtccctgagtaacctggtggcctcgctgctgaactcc
atgaaatccatcgcgtccctgctgctgctgctcttcctcttcatcatcatcttcgccctg
ctgggcatgcagctcttcgggggcaagttcaacttcgacgagacccagaccaaacgcagc
acgttcgacaccttcccccaggccctgctcaccgtcttccagatcctgacgggcgaggac
tggaacgcggtgatgtacgacgggatcatggcctacgggggtccctacttccccggcatg
ctggtctgtgtctacttcatcatcctcttcatttgtggcaactatatcctgctgaacgtc
ttcctggccattgctgtggacaatttggccgatggggacaacatcaactcgtccgcggag
gagagcaaaaaggggaagctggcggatgaagccccgggcagcggcagccaggatggcagt
gtgaaggtgccgtgcatggaggaagagaaggaggaggatgaagaagggagcgaagaagga
ggggaggaggccgaggagggcgaccaggagagcttggccgagtcccacctggacaagctg
gaggaggcgccaacggagaaagtcctgcccatcccggccggcagcgccttcttcatcctc
agcagcaccaacccgctccgggtggggtgtcacgccgtgatccatcaccacatcttcacc
aacctcatcctcgttttcatcatcctcagcagcatctcgctggccgccgaggaccccatc
cgggcccactccttccgcaacatcattctggggtacttcgactatgccttcacctccatc
ttcaccgtggagatcctgctcaagatgacagcctacggcgccttcctccacaaaggctcc
ttctgcaggaactggttcaacctgctggatctgctggttgtgagcgtctccctcatctcc
ttcgggatccactccagcgccatctccgtggtgaagattttgcgggtgctgcgcgtgctg
cggcctctccgagccatcaaccgggccaaggggctgaagcacgtggtccagtgcgtcttc
gtggccattcgcaccattggcaacatcatgatcgtgaccacactgctgcagttcatgttc
gcctgcatcggggtgcagctcttcaagggcaaattctacagctgcacggacgaggccaag
cacacgccggaggaatgcaagggcacgttcattgtgtacaaggacggggacgtggggcac
cccatggtgcgcgagagggtctggcacaacagcgacttcaactttgacaatgtcctgtcc
ggcatgatggccctgttcaccgtctccaccttcgagggctggcccagcctgctgtacaag
gcgatcgacgccaacggggagaaccagggccccatctacaactaccgggtggagatctcg
gtcttcttcatcgtctacatcatcatcatcgccttcttcatgatgaacatcttcgtgggc
ttcgtcatcatcaccttccgcgcccagggcgagcaggagtaccgcaactgcgagctggac
aagaaccagcggcagtgtgtggagtacgcgttgaaggcccagccgctccggcgctacatc
cccaagaatcggcaccagcaccgggtgtgggcggccgtgaactgctcggccttcgagtac
ggcatgttcctgctcatcctgctcaacaccatcgccctggccgtgcagcactacgagcag
tcgcagccgttcaactacgtcatggacctgctcaacatggtcttcaccggcctcttcacc
gtggagatggtgctgaagatcatcgccttcaaaccccggcactatttctgtgacgcctgg
aacaccttcgacgcgctgatcgtggtgggcagcgtggtggacatcgccgtcaccgaggtc
aatagctcggaggacagctcccgcatctccatcaccttcttccgcctcttccgcgtcatg
cgcctggtcaagctgctcagcaaaggcgaagggattcgcaccctgctctggaccttcatc
aagtccttccaggccctgccctacgtcgccctgctgatcgccatgatcttcttcatctac
gctgtcattggcatgcagaccttcggcaaagtggcgatgcaggacgggacgcagatcaac
cgtaacaacaacttccagacgttcccccaggccgtgctgctgctcttcaggtgcgccacc
ggggaggcctggcaggagatcatgctggccagcctgcccgggaaacgctgcgaccccgag
tcggacgtggggcccggcgaggaattcacctgcgggagccacttcgccatcgtctacttc
atcagcttcttcatgctctgtgccttcctgatcattaacctctttgtggctgtgatcatg
gacaattttgactacctgacccgggactggtccatcctgggcccccaccacctggacgag
ttcaaacgcatctggtctgagtacgaccccaccgccaaaggccgcattaaacacttggac
gtcgtgaccctgctgcgccggatccagccgcccctcggctttgggaagctctgcccgcac
cgtgtggcctgtaagaggctggtggccatgaacatgcccctcaacgcagacggcaccgtc
acctttaacgccaccctcttcgccctggtccgcacctcgctcaagatcaagaccgaaggc
aacttggaccaagccaacaaagagctccgggccgtcatcaagaagatctggaagagaacg
aagcccaaactcctggacgaggtgatacccccgccagaagaggaggaggtcacggtgggg
aagttttacgccacgttcctgatccaggattatttccggaagttccggaagcggaaggaa
aaggggcttctggggccagacgcctcccccagcaactccacggccctgcaggccgggctg
cagaccctgcaggacctgggccctgagatgcgccgggcgctgtcctgcgacctggaggac
ggggaggaggtggccggggagaccctgtgtgaggaggagcagctgacgtgccagacccca
gagggattgcttggcagcagccccgaccaccgacccacggcgcccgtctccgcccaggcc
gagcggggtggggagaccctggccaacgggctactggggtcccggcgcccctcctctgcc
agtctggtcaggacccccaacggcctccacagctacgaggagaacgaggggggcaggagg
agctgcccgagctaccccacatccccagcaggcgccgcatga

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