Caretta caretta (Loggerhead turtle): 125643022
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Entry
125643022 CDS
T09292
Symbol
BRWD3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125643022 (BRWD3)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125643022 (BRWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_DCAF4
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
125643022
NCBI-ProteinID:
XP_048721030
LinkDB
All DBs
Position
9:64695704..64786163
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AA seq
1789 aa
AA seq
DB search
MATAAAPTQLEAELYYLIARFLQSGPCRKSAQVLVEELEAHQLIPRRLDWQGKEHRRSFE
DLVAANAHIPPDYLLKICERIGPLLDKEIPQSVLGVQTLLGVGRQSLLRAAKDCRHTLWK
GSAFAALHRGRPPELPVNYGKPPNVVNIISAKQLTGYGRFNHLFPSSNYQHMKMHKRILG
HLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLSTLRGHSAEISDMAVNYENTLLA
AGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFSPARKGITRYLTSTGADGAICFWQWH
ANTIKFKDRPVKFAERSRPGVQISCSSFSSGGMFIATGSTDHVIRIYYLGSESPEKIAEL
ESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMTGNNLVSGE
DKVTKLKVTMVAWDRYDSTVITAVNNFLLKVWNSTTGQLLHSLSGHDDEVFVLEAHPFDQ
RIMLSAGHDGNIFVWDLDKGTKIRNYFNMIEGQGHGAVFDCKFSPDGQHFACTDSHGHLL
LFGFGCNKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHP
TRYQRLVPGRENCKDEQLIPQLGYVANGDGEVIEQVIGQQTNDQDESILDGMIRELQREQ
DLRRMNEGEAIPNPPYSRSHSINGALRSPGLDSPPNVGLRRSGQIEGVRQMHLNAPRSQM
ATERDLMAWSRRVVVNELHPGVSRVQEECRAAKGDMEVNLYTVEKRRKPSHTLQRSDYQP
GSGRSLRRNQRKRQHAYQTRSTIEHNQQGASQNARTKEESESSSEEDETVGTSDASVDDA
VAVWQSESSSSDSSSEYSDWTADAGINLQPPKRQTRQATRKICSSSEDENLKEAKGLEEK
RRKPKQTRKKKPSGLLSMEGEPSEEWFAPQWILDTIPRRSPFVPQMGDEIIYFRQGHEAY
VRAVRKAKIYNVNMQKQPWNKIELREQELVKTVGIKYEVGPPTLCCLKLAFLDPISGKMT
GESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQAE
YPDSSFQCYSVHWDNNEREKMSPWDMEPVPEGTAYPDEVGAGVPVSPEELTSLLYKPQEG
EWGAHSRDEECERVIKGIDYLLTLDISNPFAVPVDLSAYPMYCTVVAYPTDLTTIRRRLE
NRFYRRISALMWEVRYIEHNARTFNEPESPIVKAAKIVTDVLLRYIGDQSCTDILDVYNK
VKAEDLSSTDEEEEVAEVDVDSDGPGTSCGKRRVRRPIKRQPFKASPGAWKEQCKQLLSL
IYEREDSEPFRQPVDLFSYPDYRDIVDTPMDFSTVKETLEAGNYTNPLEFYKDVRLIFCN
SKAYTPNKKSRIYSMTLRLSALFENHIKNIISEYKLAMQCQKRNKPRYRKRLRSSSSSPS
SSRASSPKGKQKQVKMQPKINQNTSLPLTRTSSSVSSHVSDTTEEALGSAIGEETEGQPS
SSGLNTQNRSGNNIDPGKNRLVRSKSTPVKQDQSLDGPLTNGDSREPRIAVKRKLVSASE
EEEHLEEEEKKRELKEKPGLSSSESGESGSSSSSESRCGSDSDSESTSRTDQDYIDGDHD
YSKVVQTKPKRKIKRKISSGKRNWQGRGTGRRGRWGRWGRWSRGGRGSRGGRGGCSRGRR
GGRGGRRGRGGRGASRGATRAKRARMAEDEFENLFGGRFGENMFGGRFSRPPRIKTRNEG
RRTVLYNDDSDNDNFVHTEDPLNLGTSRSGRVRKMTEKARVSHLMGWNY
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggccgccccgacccagctggaagccgagctctactacctgatcgcccgc
ttcctgcagtccggaccctgcaggaaatccgcccaggtgctggtggaggagctggaggcg
caccagctgatcccccgccgcctggactggcagggcaaggagcaccggcgcagcttcgag
gatctggtggcagccaatgcacacatccctccagactatcttctgaaaatctgtgagaga
attggacccctcttagacaaagagatcccacagagtgttcttggagtgcagactttacta
ggcgtgggacggcaatctttgctaagggcagcaaaagactgcaggcatacgctatggaag
ggatctgcatttgcagctcttcacagaggccgacctcccgaactacctgtaaattatggg
aagccaccaaatgtggtaaatataatttctgccaagcaattaactggatatggacgcttc
aaccatttgttcccatcatccaactatcaacatatgaagatgcacaagaggattctgggg
cacttatcatctgtatattgtgtagcatttgaccgcagtgggaggcgaattttcacaggc
tcagatgattgtttggtgaaaatttgggctacagatgacggtcgtctgctctcaacgttg
cgaggacactcagctgaaatttctgacatggctgttaactatgaaaacacattgctggct
gcaggcagctgtgataaggtagtcagagtatggtgtctacgaacctgtgcaccagttgca
gtgctgcagggccattcagcttccattacgtccatacagttttctccagcaagaaaagga
ataacccgatacctcacttctactggtgctgatggagcaatctgtttctggcagtggcat
gccaatacaattaaatttaaggatcgccccgtgaaatttgctgagagatccaggcctgga
gttcagatatcttgttcatctttcagctctggtggcatgttcattgcaacaggtagcact
gaccatgtgataagaatatattatttgggctcggaatcgccagagaaaattgctgagtta
gagtcccatacggacaaagtagttgcagttcagttctgtaacaatggtgacagtttaaga
tttgtcagtgggagcagagatggaacagcaagaatatggcaataccagcagcaggaatgg
aagagtatagtcctggatatggctactaaaatgacaggtaacaacttggtatctggggag
gacaaagtaactaaactgaaggttactatggtggcttgggatcgatacgattccactgtc
atcactgcggtcaacaacttccttttgaaagtatggaactcgaccacgggacagcttctt
catagtttatctggccatgatgatgaagtttttgttttagaagcacatccatttgaccaa
aggatcatgctttctgcaggtcatgatgggaacattttcgtttgggaccttgacaaagga
acaaaaattcgcaattactttaacatgattgaaggccaaggccatggtgctgtttttgat
tgcaaattctcaccagatggacagcattttgcctgcacagactcacatgggcatctgcta
ttatttggttttggatgcaataaatattatgaaaagattccagatcagatgttcttccat
acggattatcggccactgattcgtgatgctaataactatgtgctggatgaacagacccaa
caggctccacatctcatgcctcccccattcctggtggatgtggatggaaatccacatccc
acaagataccagcgtcttgtaccaggacgggaaaattgtaaggatgaacaacttattcct
caactgggatatgtggctaatggtgacggtgaagtgattgaacaggtgattgggcagcaa
accaatgaccaggatgagagtattctggatggaatgattagggagctgcagagagaacaa
gatctgaggcgaatgaatgaaggagaagctatcccaaaccctccatacagtagatcacac
tctattaatggtgctcttagaagtccaggtttggactccccaccaaatgttggtctcaga
cgaagcggtcagattgagggggtccggcaaatgcatctcaatgctcctcgcagtcagatg
gccacagagagagatctcatggcctggagcagaagagtagtggtgaatgagctgcatcca
ggggttagcagggttcaggaagaatgccgagctgccaaaggtgatatggaagttaatctt
tacactgttgaaaagaggagaaaaccatcccacaccttgcaaaggagtgattatcaacct
ggcagtggacgatctttgagaagaaaccaacgtaaacgccagcatgcctaccaaacacgc
tccaccattgaacacaatcagcagggagcaagtcaaaatgcacgtacaaaggaagaatct
gaaagctcctccgaggaagatgaaacagttggcacaagtgatgcctctgtagacgacgct
gtggctgtatggcaaagtgaaagcagttccagtgattcttcaagtgaatattctgactgg
acagcagatgctggaattaatctccagcctccaaagagacaaaccagacaggcgactcgg
aagatctgtagcagctctgaagatgaaaatctaaaggaagctaaaggattggaagagaaa
cgaaggaaacccaaacagactagaaaaaagaaaccaagtggattactttcgatggaaggt
gaacccagtgaagaatggtttgcaccccagtggatcttggataccataccacgtcgttca
ccctttgtcccacaaatgggagatgagattatatattttaggcaaggccatgaagcttat
gtacgggcagtaaggaaggcaaaaatttacaatgttaacatgcaaaaacaaccatggaac
aaaatagaactcagggaacaagaacttgtgaagactgtaggaattaaatatgaagtcgga
cctcctacactctgctgcttgaagcttgcatttctagatccaatctcaggcaaaatgaca
ggagaatctttttccattaagtaccatgatatgccagatgttattgatttccttgtgctg
catcagttttataatgaagccaaagaaaggaactggcagattggggataggtttcgcagt
ataatagatgatgcttggtggtttggaacggtggagagtcagcagcctttccaggcagaa
tatcctgatagttccttccagtgctacagcgttcactgggacaacaacgaaagagaaaag
atgagtccatgggacatggaaccagttccagaaggaactgcttatccagacgaggttggt
gctggagttcccgtgtccccagaggaactgacatctctgctgtataaaccccaagaagga
gaatggggggcccattccagagatgaagaatgtgaacgagttattaagggaattgattat
cttctgacccttgatatttctaacccctttgctgttccagtggaccttagtgcctatccc
atgtattgcactgtagttgcttacccaactgacctcaccacaatcaggaggagacttgaa
aacagattttataggagaatctcagcattgatgtgggaggttcgatacatcgagcataat
gctaggactttcaatgagccagaaagtcctatagttaaagcagccaaaattgtaacggat
gtcttacttcgctatattggggatcagagttgtactgatatattggatgtatataataaa
gtgaaagcagaagatctaagcagtactgatgaagaggaggaggtagcagaagtagatgta
gattcagatgggcctggaacttcatgtgggaaaagaagagtaagacgaccaataaaaagg
cagcccttcaaagcaagccctggtgcttggaaagaacagtgcaagcagttgttaagccta
atatatgaacgtgaggactccgagccttttagacagccagttgatctcttctcctatcct
gactatcgagatattgtagacactccaatggatttcagcactgtgaaagaaactttggaa
gcaggaaattacaccaatcctctggaattttacaaggatgttcgcttaatattctgcaac
tctaaagcttacacacctaataaaaagtcacggatctatagcatgacgcttagactatct
gccttatttgaaaatcatattaaaaacatcatctctgaatacaagttggccatgcagtgt
caaaagagaaataaaccacgataccgaaaacgactaaggagcagtagtagttcaccatct
agtagcagagcatccagccctaaagggaaacagaaacaagtgaagatgcaacctaaaatc
aaccagaatacctcactgcctttgactaggactagctcttcagtttcatctcatgtttca
gatactaccgaggaggctctgggttcagccattggtgaagaaacagagggccaaccatcc
tcatccgggttaaatacacagaaccgaagtggaaataacattgatccagggaaaaataga
ctagtcaggagtaaatccacaccagttaaacaagatcagtctcttgatggaccacttaca
aatggggatagcagagagcctcggatagcagtcaagcgaaagttagtaagtgcctcagaa
gaggaggaacacctagaggaagaggagaaaaagagagaattaaaagaaaaacctggttta
tcttcatcagaaagtggggagtcaggatccagttcaagctctgaaagcagatgtggctct
gattcagattctgaatcaacctctagaacagatcaggattacattgatggagatcatgac
tacagtaaagttgtgcaaactaaacccaaaagaaaaattaaaaggaaaatttctagtggg
aaaagaaattggcagggcagagggacagggaggagaggtagatggggcagatggggtaga
tggagcagagggggaagaggtagcagaggaggaagaggaggctgcagcagaggaagaaga
ggaggcaggggaggaagaagaggcagaggaggtagaggagcttcacgaggagcaaccaga
gccaaacgtgcacgaatggcagaggatgaatttgagaatctgtttggaggccgatttggt
gagaatatgtttggaggacgattcagtaggccaccacgaattaaaacaaggaacgagggc
aggagaactgttttatataatgatgattcagataatgacaactttgtgcacaccgaggat
cctctgaatcttggtacttccagatcgggcagggtgcggaaaatgacagaaaaagccagg
gtcagccatctcatgggatggaattattga
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integrated database retrieval system
