Clostridium cellulosi: CCDG5_0554
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Entry
CCDG5_0554 CDS
T03806
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ccel
Clostridium cellulosi
Pathway
ccel00521
Streptomycin biosynthesis
ccel00523
Polyketide sugar unit biosynthesis
ccel00525
Acarbose and validamycin biosynthesis
ccel00541
O-Antigen nucleotide sugar biosynthesis
ccel01100
Metabolic pathways
ccel01110
Biosynthesis of secondary metabolites
ccel01250
Biosynthesis of nucleotide sugars
Module
ccel_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CCDG5_0554 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CCDG5_0554 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CCDG5_0554 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CCDG5_0554 (rfbB)
00525 Acarbose and validamycin biosynthesis
CCDG5_0554 (rfbB)
Enzymes [BR:
ccel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CCDG5_0554 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
adh_short
Sacchrp_dh_NADP
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
CDZ23685
UniProt:
A0A078KR92
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Position
I:580934..581953
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AA seq
339 aa
AA seq
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MNIIVTGGAGFIGSNFVYYMLKNHPDYRIICLDALTYAGNLHTLEEAMKNPNFRFVKGDI
ADRECVYKLFEEEKPDIVVNFAAESHVDRSIENPEIFLKTNIIGTQVMMDACRKYGIKRY
HQVSTDEVYGDLPLDRPDLMFTEETPLHTSSPYSASKASADLLVMAYHRTYGLPVTISRC
SNNYGPYHFPEKLIPLVITRALEDKTIPVYGTGANVRDWLYVEDHCRAIDLIIHKGREGE
IYNIGGHNERTNLQVVKTVLHELNKPESLITFVTDRPGHDRRYAINPEKIEKELGWNPTY
NFEQGIKVTVKWYLEHRPWWEKIISGEYQNYYKSMYSNR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaacattatagtaacaggcggagccggatttatcggttctaatttcgtttattatatg
ctgaaaaatcatcctgactacaggattatctgccttgatgcactgacttacgcaggcaat
cttcatacgcttgaagaagctatgaaaaacccgaacttcaggtttgtcaagggcgacatc
gctgacagggaatgtgtatataagctgtttgaggaggaaaagccggatatcgtagtcaac
tttgcggcggagtcgcatgttgaccgctcgattgaaaatccggagattttcctcaaaaca
aacataattggcacacaggttatgatggacgcctgccgcaaatacggcataaagcgttat
catcaagtctcaaccgacgaggtttatggcgacctgccgcttgacaggcccgaccttatg
tttactgaagaaacgccgttgcacacttcttcgccctattcggcttcaaaggcaagcgcg
gatctgcttgttatggcttatcaccgcacttacgggcttccggttacaatttcgcgctgc
tcgaacaactatggcccttatcatttcccggaaaaactgatcccactggttattacaagg
gcgctggaagacaagactattcctgtctatggcaccggcgcaaacgtccgggattggctg
tatgttgaagaccattgcagagccattgaccttattatccataagggccgcgaaggagaa
atatacaacatcggcggtcataatgaacgcacaaacctgcaggttgtcaagacggtgctt
cacgagctaaacaaacctgaaagccttattaccttcgtcaccgaccgtccggggcacgac
agaagatatgcgataaatcctgagaagattgaaaaggaactcggatggaaccccacatat
aactttgaacagggcatcaaggtaaccgttaaatggtatcttgagcacaggccttggtgg
gaaaagataatctcaggtgaatatcagaactactataagtcaatgtattcaaatagataa
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