Clostridium cellulosi: CCDG5_1958
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Entry
CCDG5_1958 CDS
T03806
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccel
Clostridium cellulosi
Pathway
ccel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCDG5_1958 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccel03019
]
CCDG5_1958 (pnp)
03016 Transfer RNA biogenesis [BR:
ccel03016
]
CCDG5_1958 (pnp)
Enzymes [BR:
ccel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CCDG5_1958 (pnp)
Messenger RNA biogenesis [BR:
ccel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCDG5_1958 (pnp)
Transfer RNA biogenesis [BR:
ccel03016
]
Prokaryotic type
tRNA degradation factors
CCDG5_1958 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
Motif
Other DBs
NCBI-ProteinID:
CDZ25050
UniProt:
A0A078KV47
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All DBs
Position
I:2085098..2087323
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AA seq
741 aa
AA seq
DB search
MFENYRTFETDFAGKKLIIETGKVAQLSNGSCLVRYGDTVVLVNVCASDKPREGVDFFPL
AVDYEERLYAVGKIPGSFLKREGKPSEKAILTSRLIDRPIRPLFPKDMRNDVTVSILVLS
VEPDCQPEIAGMIGTSVAISISDIPWNGPIGGVAVGYVDNEFVINPDAAQREKSEMYVTV
AGTEQKVVMIEAGANEIPEDIMFNGIMRAHEEIKKIVAFIKDIQAQVGKPKFEYQSFEVD
PEMFEDIKNFAEEDVKYALDTNDKKVREERLKVVKEKVIEEFSEKYPDSEQAIDECLYKL
QKMIVRRWLLDEHRRVDGRGMNEIRPLAAEVGLLPRCHGSGLFTRGQTQVLTVATLGPIG
DQQLLDGIDFEDTKRYMHHYNMPAWTVGETKPARGPGRREIGHGALAERALEPVIPSEEE
FPYAIRLVSEVLSSNGSTSQGSVCGSTLALMDAGVPIKAPVAGISCGLVTEGDRFLTMID
IQGIEDFFGDMDFKVAGTHKGITAIQMDLKIDGLTPEIIKEALIKTRDARYYILDEVLLK
AIDKPRPELSKYAPKMITTQIDVDKIRDVIGSGGKVIQKICSDCDCKIDIEEDGRVFIAA
VNTENGEKALKIINAITKDPEIGTFYIGKVTRIMPFGAFVEIAPGKEGLVHISKLDVKHV
DKVEDAVKVGDEITVKLIEIDNQGRLNFSRRDALIELEGMTPEPEESRPPRRDFHKDGGS
RPFHSREGGHSFEKRRDGKNF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaattaccgcacatttgaaacagatttcgcgggcaaaaaacttataatcgaa
acaggaaaggtcgcacaactctcaaacggttcatgtcttgtcagatacggcgataccgtg
gtattggtcaacgtctgcgcgtcggacaagccgcgtgagggcgttgatttcttccctctc
gccgtcgattacgaagagaggctctatgcagtcggaaaaatcccgggcagctttttaaag
cgcgaagggaaaccgtctgaaaaggctattctcacaagccgtcttatagaccgtccaatc
cgtccgctgttcccaaaggatatgcgcaacgatgtaaccgtatccattcttgtgctctct
gttgaaccagactgccagccggaaattgcgggcatgataggtacttcagtggccatctct
atttccgatatcccgtggaacgggccgataggcggcgttgctgtaggctatgttgacaac
gaatttgtcatcaacccggacgcagcacagcgtgagaagagcgaaatgtatgttaccgtc
gccggtaccgaacaaaaggttgttatgattgaagcgggcgcaaatgaaataccggaagat
attatgttcaacggtattatgagggcccatgaggaaataaagaaaattgtcgctttcatc
aaagatatacaagcacaggtaggaaagccaaagtttgaataccagtcctttgaagtcgac
cccgaaatgtttgaagatatcaagaatttcgccgaggaagacgtaaaatatgccctcgat
acgaacgacaagaaagtccgcgaggaaagacttaaggtcgtaaaagagaaggttatcgaa
gagttcagcgaaaaatatcccgacagcgaacaggcaattgacgaatgcctttataagctc
caaaagatgatagtccgcagatggctgcttgacgaacatcgccgtgtcgacggacgcgga
atgaacgaaattcgtcctctggcggctgaggttgggctgcttccgcgctgccacggctct
ggactgttcacaagaggccagacccaggttcttacagttgcgacactgggcccgataggt
gaccagcagctccttgacggcattgattttgaggatacaaagcgttatatgcaccattac
aacatgcctgcctggactgtcggcgaaaccaaaccggcacgcggcccgggcagacgtgaa
atcggtcacggcgctcttgccgagcgcgcccttgagccggtaatcccgtcggaagaagag
ttcccgtacgctatccgccttgtttcagaggttttgtcctccaacggctctacttcacag
ggttcagtttgtggttcaacactggcgcttatggacgccggcgtgccgataaaagcacct
gttgcgggtatttcctgcggcctcgtcactgaaggcgaccgcttcttgacaatgattgat
attcaaggtatcgaagacttctttggagacatggacttcaaggttgccggtactcacaaa
ggcattacagctatccagatggatttgaagattgacggattgacccccgaaatcattaaa
gaagcgctcataaagacgagagacgcaaggtattatatccttgacgaagtgttgctcaag
gcaattgataaaccgcgccccgagctgtctaagtacgctccaaagatgataactactcag
atagacgtcgacaaaattcgtgatgttatcggttccggaggcaaggtcatccaaaagatt
tgctcagactgtgactgcaaaattgacatagaagaagacggacgtgtatttatcgccgcc
gtcaacactgagaacggagagaaagccctcaagataatcaacgctataacaaaggatcct
gaaatcggaacattctatattggcaaggtaacacgcattatgccattcggcgcatttgtt
gaaattgcgccgggcaaagagggtcttgtccacatctctaaactcgacgtaaaacatgtc
gacaaggtcgaggatgccgtcaaggttggcgacgaaatcacagtgaaactcattgaaatt
gataatcaaggaaggttaaacttttcacgccgcgatgctcttattgagcttgagggtatg
acccctgaaccggaagagtcccgccctccacgccgcgatttccataaagacggcggttct
cgccccttccattcacgtgaaggcggccactcctttgaaaagcgtcgcgatggaaagaat
ttttaa
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