Cohnella cholangitidis: FPL14_12085
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Entry
FPL14_12085 CDS
T07708
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cchl
Cohnella cholangitidis
Pathway
cchl03022
Basal transcription factors
cchl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cchl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FPL14_12085
09124 Replication and repair
03420 Nucleotide excision repair
FPL14_12085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cchl03021
]
FPL14_12085
03400 DNA repair and recombination proteins [BR:
cchl03400
]
FPL14_12085
Enzymes [BR:
cchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FPL14_12085
Transcription machinery [BR:
cchl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FPL14_12085
DNA repair and recombination proteins [BR:
cchl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FPL14_12085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QMV44993
UniProt:
A0A7G5C709
LinkDB
All DBs
Position
complement(2551236..2553515)
Genome browser
AA seq
759 aa
AA seq
DB search
MPDKIALSVRALVEYVYLSGSIDSGFRAVSALSEGTKAHQKIQKQYGEQDKKEVYVSAEV
LHEDLLFSVDGRCDGLLLAEDGGVTVDEIKSTSRDIGAMTEEDSQPVHWAQAKFYAYMYA
VDNGMRQMRVRLTYVQVDTEEQKRFEQEVSLEELEAFVREVVERYAPYARLLHRNKRARD
ESIAGLAFPFADYREGQRKLVGAVYKSIDEGRKLFAKAPTGIGKTISTLYPAIKAIGLGK
IQHLFYLTARTITRTAAEDTLSLMKAHGLNLRSVTVTAKDKICFQEEVDCRGDKCPYADG
YYDRINGAILDMLGNETLMNREVVERYARKHRVCPFEMSLDAAYGADAVVCDYNYIFDPR
VSLKRMTGEQKHQTVLLADEAHNLIDRAREMYSAELEKRDFLELEREFKGVQADIHSAAK
AVNKWFIERKKRSDGQATMTKDRPADLMEMVEAFVSEAERVLAGGGSGSGSAKLLEVYFR
AVSFIRIGKLYDERYITYSEVVRNDVRLKMFCLNPSHLLRQMGKGYRAHVFFSATLSPLN
YFMDMLGADEEDYSVTLGSPFAREQWEVSIVPLSTRYADRERTKPRLVSTLLELVRGRPG
NYLFFFPSYEYMNGVYGDFVAAEGDIRTLLQTSDMPEEERESFLAAFDAGNTRTLVGFAV
MGGIFSEGIDLAGDRLSGVAVIGVGMPQIGLERNLIKSYFDDEGRNGFDYAYVYPGMNKV
LQAGGRLIRSERDRGALMLVDDRYLQPQYARLLPEEWLG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttgccggataagattgccctgtcggtgagagcgctagtcgaatatgtttacctaagcggg
agcatcgattccggtttccgggcggtaagcgcgctgtccgaagggacgaaagcccatcag
aaaatccagaagcaatacggcgagcaagacaagaaggaagtgtacgtaagcgcggaggtt
ctccatgaggatctccttttctccgtggacggacgttgcgacggtcttcttcttgccgag
gatggcggcgttacggtagacgaaatcaaatcgacgtcgagggacatcggggcgatgacg
gaggaggactcgcagcccgtccattgggcgcaagcgaagttctatgcgtacatgtacgcc
gtggacaacggcatgcggcaaatgcgcgttcgcttaacctatgttcaagtggacacggag
gaacagaagcgtttcgagcaggaagtctccttggaggagctagaggcgttcgtgcgggaa
gtcgtggaacgttatgctccttatgcgcgtctgcttcatcgcaacaaacgcgcccgggac
gagagcatcgcgggtttggcatttccgttcgcggattatcgggaagggcagcggaagctc
gtaggcgccgtctataagtcgatcgacgaagggcggaaattgttcgccaaagctccgacc
ggcataggcaaaacgatctcgacgttgtatcccgcaatcaaggcgatcggcctcgggaag
atccagcatctgttctacttgacggcccgaacgatcacgcggacggcggccgaggatacg
ttgtcccttatgaaagcccacgggctaaaccttcgttcggttacggtaacggctaaggac
aagatttgttttcaagaggaagtcgattgccggggagacaaatgtccgtacgcggatgga
tactatgatcggataaacggcgcgattctggatatgctgggcaacgaaacgttgatgaat
cgcgaggtcgtcgagaggtatgcccggaaacatagggtttgtcccttcgaaatgtccctc
gatgcggcatacggagcggacgcggtcgtttgcgattacaattatattttcgatccgcgc
gtttccttgaaaaggatgacgggggaacagaagcatcaaaccgtattgttggcggacgag
gcgcataatttgatcgatcgggcccgagagatgtattcggccgaattggagaaaagggat
tttctcgaactggagcgggagttcaagggagttcaggcggatattcattccgctgccaaa
gcggtgaataagtggttcatcgagcggaagaagcgatcggacggacaagcaacgatgacg
aaggaccgaccggccgatctaatggaaatggtggaagctttcgtctccgaggcagagaga
gtgcttgccggaggcggttcgggatcgggcagcgcgaagctgctggaggtttacttccga
gcggtcagcttcattcgaatcgggaagctgtacgatgagagatacattacctattcggaa
gtcgttcggaacgacgtgcggttgaaaatgttctgcttgaatccgtcgcatttgcttagg
cagatggggaaagggtatcgcgcgcatgtgtttttctcggctacgctgtctccccttaat
tactttatggacatgctgggcgcggacgaggaggactattcggttacgcttggctctcct
tttgcgagggagcaatgggaggtctctatcgttccgctttctacgaggtacgcggaccgg
gaacggacgaagccccggctcgtcagtacgctattggagttggtgcgaggacgtccgggc
aattatctgttttttttcccatcctacgaatacatgaacggagtatatggggatttcgtc
gcggccgagggggatattcgcaccttactgcagacgtccgatatgccggaggaagagcgg
gaaagcttcttggccgcattcgacgcgggaaatactcggacgctggtcggattcgcggtc
atgggcggcatattctccgagggcatcgacctggcgggcgaccgcctgagcggagtcgcg
gtcatcggagtaggcatgccgcagatcgggttggaaagaaatctgatcaagagctatttt
gacgacgaagggcgcaacggtttcgactacgcgtacgtttaccccggcatgaacaaagtg
ctgcaggcgggcggaaggttgatccgttcggaacgggaccggggagcgcttatgctcgtt
gacgaccgctacttacagcctcagtatgcgcgcttgctgccggaggagtggctgggctga
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