Clostridium chauvoei: BTM20_11515
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Entry
BTM20_11515 CDS
T05083
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cchv
Clostridium chauvoei
Pathway
cchv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cchv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTM20_11515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cchv03019
]
BTM20_11515
03400 DNA repair and recombination proteins [BR:
cchv03400
]
BTM20_11515
Enzymes [BR:
cchv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTM20_11515
Messenger RNA biogenesis [BR:
cchv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTM20_11515
DNA repair and recombination proteins [BR:
cchv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTM20_11515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
MCPVI
DUF763
Motif
Other DBs
NCBI-ProteinID:
ATD55827
UniProt:
A0ABD4RGE0
LinkDB
All DBs
Position
complement(2513234..2514997)
Genome browser
AA seq
587 aa
AA seq
DB search
MSTPIEILKKYFGYTSFREGQFEIISNILRRRDIFCIMPTGGGKSLCYQIPTMIQDGLTI
VISPLISLMKDQVDNVNDIGIEAEYINSTQSMEEIKNILRRCYSGKVKLLYIAPERLENE
FFNRMLRKLNISQIAIDEAHCVSMWGHDFRKSYRSIAPFINSLNKRPIVTAFTATATEEV
RKDVIKLLQLENYYMHLGSFDRENLAISIYKEEDKAEFVKDFIKEREEQSGIIYCATRKE
VDALYYYLKERNINIAKYHGGLKDQEKEYYQEEFLKDNIPIMIATNAFGMGIDKSNVRYI
IHFTLCKNIENYYQEIGRGGRDGEKTECILLYNRADIRTLEYLIYTTAGNDRKEIEIRKL
QKMIDFCETHDCYRMFILNYFGEINGVNYCSNCRNCLNNDDLRDFTIEAQMILSCVYRTR
EQYGISVLIDILRGFKGPKIIQYKLDKLTTYGIMKEYNSRFIRNLIKTLIDLGYVNLKEG
TYSMLKLNNKSIRVLKSKEKVICKLIDESEEKVIDKELFNKLRLWRKERSIKENIKPYII
FSDSTLIDLANNKPKNKEELLNIRGMGEKKFEKYGEEVLNLISGILT
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagtactccaatagagatattaaaaaaatactttggatatacttcatttagagagggt
caatttgagataatatctaatattttaagaagaagagacattttttgtattatgccaact
ggtggtggaaagtcactatgttatcaaattccaactatgattcaagatggattaacaata
gttatatcacctcttatttctttaatgaaagatcaagtagataatgtaaatgatataggg
atagaagcagaatatataaacagtacacaatctatggaagaaattaagaatatacttaga
agatgttatagtggaaaagttaaacttttatacattgcaccagaaagattagagaatgaa
tttttcaatagaatgttaagaaagttaaatataagccaaatagctatagatgaagcacat
tgtgtttctatgtgggggcatgattttagaaaaagttacagaagcatagctccatttata
aacagtttaaataaaagaccaatagttacagcttttactgcaacagctacagaagaggta
agaaaagatgttataaaacttctacaacttgaaaattattatatgcatttaggaagcttt
gatagagaaaacttagctatatcaatatataaagaagaagataaagcagaatttgttaag
gactttattaaagaaagagaagaacaatcaggaattatttattgtgccacaagaaaagaa
gtagatgcattatattattacttaaaagaaagaaatattaacatagctaaatatcatggt
gggttaaaggatcaagaaaaagaatattatcaagaagaatttttaaaggataatattcct
ataatgattgcaactaatgcttttggaatgggaatagataaatctaatgttaggtatata
attcattttaccctatgcaaaaatatagaaaattattatcaggaaattggcaggggtggg
agagatggagagaaaacagagtgcatcttattatataatagggctgacattagaacctta
gaatatttaatatatacaacagcagggaatgatagaaaagaaatagaaataagaaagctt
caaaaaatgatagatttttgtgaaactcatgattgttatagaatgtttatattaaattac
tttggagaaataaatggtgtaaattattgtagtaattgtagaaattgcttaaataatgat
gatttaagagattttacaatagaagctcaaatgatattatcctgtgtatatagaactaga
gagcaatatggaatatctgtacttatagatatattaagagggtttaaagggcccaaaata
atacaatataaattagataaattaactacatatggaataatgaaagagtataatagtaga
tttattagaaatttaataaagacattaatagacttagggtatgtaaacttaaaggaagga
acatattctatgttaaagctaaataataaatctataagagttttaaaatcaaaggaaaaa
gttatttgtaaattgattgatgaaagtgaagaaaaagttatagataaagaattatttaat
aaattaaggctttggagaaaagaaagatctattaaagaaaatataaaaccatatataatt
ttctcagattcaactcttattgatttagctaataataaacctaaaaataaagaagagttg
ttaaatataagaggtatgggagaaaagaagtttgaaaaatatggagaagaggttcttaat
ttaattagtggtattttaacttga
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