Coprinopsis cinerea (gray shag): CC1G_14222 Help Entry CC1G_14222        CDS       T01275                                  Name (RefSeq) superkiller protein 3 SKI3   KO K12600   superkiller protein 3 Organism cci  Coprinopsis cinerea (gray shag) Pathway cci03018   RNA degradation Brite KEGG Orthology (KO) [BR:cci00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CC1G_14222  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cci03019]     CC1G_14222 Messenger RNA biogenesis [BR:cci03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ski complex      CC1G_14222 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_19 TPR_2 TPR_16 TPR_1 TPR_14 TPR_17 TPR_8 TPR_CcmH_CycH TPR_11 TPR_12 TPR_7 ARM_TT21_N TPR_22 ANAPC3 TPR_9 HemY_N ARM_TT21_C TPR_20 Motif Other DBs NCBI-GeneID:  9379229 NCBI-ProteinID:  XP_002911689 UniProt:  D6RL87 LinkDB All DBs Position 3 AA seq 1405 aa AA seqDB search MSSTKALLKSARDKLNKKDFAGARDAAERILDFEGANYTAHVFLALALLELGENERSEQV YKSAIELEPQQLLARQGLAKFYERTGNTGALLESLEELVKAYVKANDATKVAETLQRVLE IRRTEGSKPEARIRKAFLVQTLLLFLPNSPYYSLLSTLPPPDPTNPTSSTVFLTQSIIHD SLPTYEEIVEILEKEEETKTSKEFNARRMRLGAPKPDVIRRDVDREVCEASKLPELYDEI LSHPKATDELRLSTESKLLRYKQKHLYSIPASDEKTKGKLLKELEELVQGAILLKRRDER TWCLFLDWQDYEDVADIDQGLLKTFVELFPENALSEVVRGYFWFHNIRLEEDEERDKEEG KEEVDTSETGLDTLLNAPTSTSDGVLPRRILSDAYLFIEDYENAAAIAKEALRKLDEVES SLGRTMKKTRMGLQVVLLTSLTHLFPPKHHIQAMELITQVLNFSPLNIKTLMAKGYILQA RKEWADAQSCFDQVVEHSDDDALVLRAQEESAWCETLLGVGQSAIDKLKAVCKSLEGLAI ENELDLARCLWRIGQSYWNLGGDERQHAFPNFIAALKKDPEYAAAFTSLGLHYADYASPP DPIRASKCFQKAFELDPRQTVAAQRLATGFADEQEWDLVEVIARRTIEGEGGLEAGMKAA IQAFQVALRAEPDDGNLWLRLGEAYSKAGRYVAAVKALERAHVLDEKDWLPQYFIAVSQA GVGLYAEAIQGFKALLEEHPLELGIIASLAQAHLQLGVVELNTGFRSRAESSFITVGELA LKIIDAHPGFRGVAWKLITDAAYHLSRLSSFENFEGVKEVHDAFDKLLPGISEELGGEVN PKPEEPEASVEGRSMLRIAIRAAEYRIGLPSTSSTPDHSAWYDLGASVHLWALRTRKEDK LGPLVIKYFSKAVKHDPGNDKYWVALGLAYFTTTPRAAQHAFVKALEIDGKNAQTWATLG LLYLHHGDVDLAEEVLQRAQTLDPDCTVAWVGQAVAAELRGERAHADALFVHATTLDEIL PEADYNTSYRLFSRPRVVSQSPAKVLDDLLPSYYLLTRYCSRRPHDAAGLHLFALVCERL GHVAFGRKLVQHAIEILERVYEHTEDPIVERQFMIANATLGRLNLAYGDPDASLPSFESV LALVQEDASKELKSKLEAQARLGVGIAQMMQTDFGSALATFQEAQRVAEEESACEVLKSQ TSIVLAQVLWSLGEAEFREAAKTELLKCISEESTNLAAIKSLAAMGILSSDEGLVDAAVS EIVALPPDERIQLDSERNVDHLLIQYHLSRGELTQALKLAEKSLFCRPADQGRRNTLASL LLKADSPERALALLRQSEHSGGPSDEDGNLKLSLRPQSLAVKALAHARVNAIDEALRCAQ KAIMLRPGGVTGWKVLAQVRQISIY NT seq 4218 nt NT seq  +upstreamnt  +downstreamnt atgtcatcgactaaagctctcctcaaatccgctcgcgataagctcaacaagaaggacttt gcgggtgcgagggatgcggcggagaggattttagatttcgagggtgcaaattacactgca catgtctttttggcactggcgttgctcgagttgggcgagaacgagagaagtgagcaggtt tataagagtgcgattgaactcgaaccccagcagctattagctcgacaaggccttgcaaag ttttatgaacggacggggaatactggtgcattgttggagagtctggaggagttggtgaag gcatatgttaaagcaaacgatgcgaccaaagttgccgagacgttgcagagggtgttggag attaggaggacagaaggaagtaaacctgaagcacgtatacgcaaagcctttctggttcaa actctcctcctgttccttcccaactcgccttattattccctcctttccacactcccacct ccagatcctacaaacccgacatcctcgactgtctttttgacacagagtatcatccatgat tctttgcctacctatgaggagattgtggaaatcttggagaaggaggaggaaacgaagacg agtaaagagttcaatgcgaggaggatgaggcttggagcgcccaaaccagatgtgattcgg agggatgtcgatagagaggtttgcgaggcatccaagctaccggaactctacgacgagatc ttgagtcacccaaaagcgacggatgaactccgcctatccacggaatccaagcttctgagg tataagcagaagcatctgtactcaatccctgcgagcgatgagaagacgaaggggaagctg ttgaaggagctggaagagttggtgcagggtgcgattctgttgaagaggagggatgagagg acgtggtgtttgtttttggattggcaggattatgaggatgtagcggatatcgatcagggg cttctcaagacgtttgtggagctgttccctgagaacgcactttcagaggttgtgagaggg tatttctggtttcataatattcggttggaagaggacgaggaaagggataaggaggagggg aaggaggaggttgataccagcgagacagggttggatacccttctgaatgctcccacctca acttcggatggcgtactccctcgaaggattctcagtgatgcatatctcttcatcgaggac tacgaaaatgctgccgctatcgctaaagaggcgttgcggaaattagacgaagttgaatca tcattgggccggacgatgaagaagacacgaatgggactccaagttgtcctcctaacctcc ctcacccacctcttccccccaaagcaccacattcaggcgatggagttgatcacacaagtc ctcaacttctcccccttgaatatcaaaaccttgatggcgaaaggctacatcctccaagct cgcaaggaatgggcggatgctcaaagctgcttcgaccaagtcgtagaacattccgatgac gatgcgctggtcctgagagctcaggaggagagtgcttggtgcgagacattgcttggtgtt gggcagtcggcgatcgacaaattgaaggcggtatgcaagagtttggaaggactggctatt gagaacgagttggatcttgccagatgcttgtggagaatcgggcagagctattggaatctc ggtggtgacgagcgacaacacgcattccccaatttcatagccgcccttaaaaaggacccg gaatatgcagctgcattcacatctcttgggttgcattacgccgactatgcctctccgccg gatcccatccgagcatccaagtgtttccagaaagcgtttgagctggatccgaggcagaca gtggctgcacaaaggctggctactggatttgcggatgaacaagagtgggacttggtcgag gtgattgctagacggacgattgaaggtgagggaggtttggaggctggtatgaaagccgcg atccaggcgttccaggtggcgcttagagccgaacccgatgatgggaacttgtggttgcgg ctgggagaggcctacagcaaggctggaaggtatgttgctgcagtgaaggcactcgagcgt gcacatgtcctggacgagaaggattggttgcctcagtacttcattgctgtctcacaggct ggggtcggactttatgccgaggcaatccaggggttcaaggcgctactcgaggagcaccca ttggaattgggcatcattgcatctctggcgcaggcgcatctccaactcggcgttgtggaa ctcaacactggcttcagatccagggccgaatcgtcgttcatcactgtaggagaattggca ctaaagatcattgacgctcatccgggtttccgcggtgttgcttggaagttgatcacagat gctgcctaccacctttcaagactttcctcgttcgagaatttcgagggtgtcaaagaggta catgatgcgtttgataaactgcttcctggtatcagtgaagagcttggaggggaagtcaat ccgaaacctgaagaaccggaggcgagcgttgaggggagaagtatgttgcggattgcgatt cgagcggctgagtataggattggcctgccctcgacatcaagcacccctgaccacagtgcg tggtatgatctcggggcgtctgtacacctctgggcactccgaacgcgcaaggaagacaaa ttgggtccgctcgtcatcaagtatttctccaaagctgtcaagcacgaccctggaaacgat aaatactgggttgcactcggtttggcatatttcacgacgactccaagggcggctcagcat gcgttcgtcaaagcactggagatagacggaaagaatgcgcagacgtgggctacgctcggg ctgctgtatctgcaccatggggatgtggatttggcagaggaggtgctgcagagggcacag acgcttgaccccgactgtacagttgcgtgggttgggcaagctgttgctgctgagctgcgg ggggagagagcgcacgcggatgcgttgttcgtgcatgctactacgctcgatgagattttg cccgaggcggattataatacgagctatagattgttcagtcgcccgagggtggtttcacaa tctccggccaaagttttggacgatcttctcccctcgtattacctccttacgcggtattgc tcgagaaggccgcacgatgctgcgggtctacacctcttcgccctcgtctgcgaacgtcta ggccatgtcgcattcggtcgcaaactcgtccaacatgccatcgagatcctcgaacgtgtt tacgaacatacagaagaccccatcgtcgagcgtcaattcatgatcgccaacgctactctg ggccgactcaacctcgcgtatggcgaccctgatgcctccttgccatctttcgagagtgtc ctcgccctcgtccaggaagacgcgagcaaagagctgaagagcaagctggaggcacaggcg aggttgggagttggtattgcgcagatgatgcagactgatttcgggagcgccttggctacg ttccaggaggcgcagagggtggctgaggaagagagtgcgtgtgaggtactgaagagtcag acgagtatcgtccttgcacaagttctttggagccttggggaggcagagtttagggaggct gcaaagaccgaactattgaaatgcatttcggaggagagcaccaatctggctgcgatcaag tcattagccgcaatgggcattttgagcagtgatgaagggttggtagatgccgctgtttcg gagatagtggccctccctccagatgagaggattcagcttgattctgaacgcaatgtggac catttgttgattcaatatcatctaagccggggcgagttgactcaagcactcaagttagcg gagaagagtctattctgcagacctgctgatcagggccgaagaaacaccttggcttcgctt ctactcaaggctgattcaccagagcgagctcttgctttgctacgccaatccgagcattcc ggaggacccagtgacgaagacgggaatctaaaattgtcgttgaggcctcaaagtttggct gtgaaagcgctggcacatgcgagggtgaatgcgattgatgaagcgctaaggtgtgcgcag aaggcgattatgttgaggccgggtggtgtgactggatggaaggttttggcgcaggtcagg cagattagtatctattaa

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