Coprinopsis cinerea: CC1G_15845
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Entry
CC1G_15845 CDS
T01275
Name
(RefSeq) DNA-dependent RNA polymerase II second largest subunit
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cci
Coprinopsis cinerea
Pathway
cci03020
RNA polymerase
cci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CC1G_15845
09124 Replication and repair
03420 Nucleotide excision repair
CC1G_15845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cci03021
]
CC1G_15845
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_15845
Enzymes [BR:
cci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CC1G_15845
Transcription machinery [BR:
cci03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CC1G_15845
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CC1G_15845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
MRNIP
Motif
Other DBs
NCBI-GeneID:
6005566
NCBI-ProteinID:
XP_001829140
UniProt:
A8N2R8
LinkDB
All DBs
Position
1
AA seq
1222 aa
AA seq
DB search
MSQEFSQDHYAFDDPNYGQEEYDEDYAPITQEDCWTVISSFFDQKGLVRQQLDSFDEFVQ
NTMQELVDENSDLILDQADQHTGQAGDMTRRYEIKFGQIYLSRPTVTEADGSVVPVFPQE
ARLRNLTYSAPLYIEMRKRVLVGREDPAVPGDITWEAEHEDTDGDAAKIWIGKVPIMLRS
SFCILHELRDQDLYDLNECPYDSGGYFIINGSEKVLIAQERMATNHVYVFAKAQPSPINF
LAEIRSAVERGGKTISQFQVKMFHRNQERSLGNVMKATIPYIKVDIPIWVVFRALGVISD
RDILEHICYDMQDAQMLEMLKPCIDDGFVIQDREVALDFIGNRGTTTGLPRDRRIRYAQE
ILQKEMLPHISMAEGSESKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLA
NLFRMLFRKLTKDVYRYLQKCVETHKEFNLSLAVKHQTITNGLKYSLATGNWGDQKKSMS
SKAGVSQVLNRYTYASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACG
LVKNLALMACISVGSYSAPVIEFLEEWGLESLEENAHSTTPCTKVFVNGVWMGVHRDPAN
LVKTIKKLRRKDDISPEVSVVRDIRERELRLYTDAGRVCRPLFIVENQQLVLQKKHVRWL
ANSENDDGEEWKWENLIKSGIVELLDAEEEETVMICMTPEDLEVSRRQSEGMEIQDHEDY
DPAARLKAGTHAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIFLT
NFLIRMDTMANILYYPQKPLATTRSMEYLKFRELPAGQNSIVAILCYSGYNQEDSVIVNQ
SSIDRGLFRSIYYRSYMDLEKKSGIQQLEEFEKPTRETTLRMKHGTYDKIEDDGLIAPGT
NVTGEDIIIGKTAPIPPDSEELGQRTRTHTRRDVSTPLKSTENGIVDQVLITTNSEGQKF
VKVRVRSTRIPQIGDKFASRHGQKGTIGIAYRQEDMPFTAEGIVPDLIINPHAIPSRMTI
GHLVECLLSKVATLIGNEGDATPFTDLTVEGVSTFLRQRGYQSRGLEVMYHGHTGRKLQA
QVYLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGI
AGFLKERLFDASDAYRLHVCDICGLTAIANLKKQSFECRACKNKTACSQLYIPYAAKLLF
QELQSMNIAARLYTVSSGRIRD
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagagttctcgcaggaccactatgccttcgatgaccccaactatggacaggaa
gaatacgatgaggactatgcgccaattactcaggaagactgctggacggtgatctccagt
ttcttcgaccagaaaggtcttgtccggcagcaactcgactctttcgatgaattcgtgcaa
aatacgatgcaggagttggtagacgaaaactcagacctcatcttggaccaggcagaccag
catacaggccaggcaggcgacatgacccgccgctacgagatcaagttcggccaaatctat
ctgtcgcgtccaaccgttacagaggcagacggttccgtcgtacccgttttccctcaagaa
gctcgtctgcgaaacttgacatactcagcaccgctgtatattgagatgagaaagcgcgtt
ttggttggtcgggaagatcctgcagtgccaggcgacattacttgggaggcagagcacgaa
gacaccgatggcgacgctgcgaaaatctggatcggaaaggtccccatcatgttgcgctcg
agtttctgcattctccatgaactgcgtgaccaggatctttacgacctcaacgaatgtccc
tatgactctggaggatactttatcatcaacggttccgagaaggtgctcattgctcaagaa
cggatggccaccaaccacgtctacgtctttgcgaaagcgcaaccttcccccatcaacttt
ttggccgaaattcgtagcgcagtagagcggggtggcaagactatcagtcagttccaggtc
aagatgttccacagaaatcaggagcgttcgctcggaaacgtcatgaaagcgaccatcccc
tacattaaggtcgatattcccatctgggttgttttccgcgctttgggcgtgatctccgac
cgcgacattctcgaacacatttgctacgacatgcaggacgcccaaatgttggaaatgttg
aagccctgtatcgacgatggtttcgttattcaagaccgtgaagtggcactcgacttcatt
ggaaatcgtggtactaccaccggccttcctcgcgaccgccgtattcgatatgcgcaggaa
atcctgcagaaggagatgttgccccacatctcgatggctgaaggctccgagtccaagaag
gcctacttcttcggctacatgatccatcgactgcttcttgccgctcttgaacgacgagaa
ctcgacgatcgtgatcacttcggcaagaagcgacttgaccttgctggcccccttctcgcc
aacctgttccgtatgctcttccgcaagctcaccaaagatgtctatcgctacttgcagaag
tgcgtcgaaacacacaaggagtttaacctttcccttgctgtcaagcaccaaacgatcacc
aacggtctcaaatactcgttggccacaggaaattggggtgatcagaagaaatccatgtcc
tcaaaggccggtgtctcacaggtgctcaaccgatacacgtatgcttccacactctcccat
cttcgtcggtgcaacactccactgggacgagaaggaaagattgccaaacctcgtcagtta
cacaacacccattggggcatggtttgccccgccgaaacgcccgaaggtcaagcttgcggt
ctcgtcaagaacttggccttaatggcatgtatttccgtcggttcctattccgcacccgtc
atcgagttcttggaggagtggggattggagtccttggaagaaaatgcccattcgaccaca
ccttgcacgaaggtctttgtcaatggtgtctggatgggcgttcacagagaccctgccaac
ctcgtcaagaccatcaagaagctgcgacggaaggatgatatcagtcccgaagtctcagtg
gttcgcgacatccgagaacgagaactccgtttgtatactgacgctggtcgcgtctgtcgc
ccgctcttcatcgtggagaatcagcaactggttctgcagaagaagcatgtgcgatggttg
gctaactcggagaatgacgatggcgaggaatggaagtgggaaaacctcatcaagtccggt
attgtagagctgttggatgccgaagaagaggagacggtgatgatctgtatgacgccggaa
gatctcgaagtctctcgacggcaatccgaaggcatggagatacaggaccatgaagattac
gatcctgctgcgcgcttgaaggcaggcacccatgcccatacttggacccactgcgagatt
catcccagtatgatccttggtatctgtgccagtatcatccctttccccgatcacaaccaa
tcccctcgtaacacctaccaatccgccatgggtaaacaagccatgggtatcttcctcacc
aacttcttgattcgtatggacaccatggccaacatcctctattaccctcaaaagcccctc
gccactactcgctccatggagtacctcaaattccgagaactccccgccggccaaaactcc
atcgtcgccatcttgtgttacagcggttacaaccaggaagactccgtcattgtgaaccaa
agttccattgaccgaggtctgttccgaagtatctactaccgaagctacatggatctagag
aagaagagcggcattcagcagttagaagagttcgaaaagccgacgagggagaccacgctc
cgcatgaagcacggaacttacgacaagatcgaggacgacggtttgattgctccgggtacc
aacgttactggtgaagacatcatcattggcaaaacagcacccatccctccagacagcgag
gaactcggccaacgtacccgaacgcacacaagacgcgatgtctcgacgcctttgaagagc
acagagaatggtatcgtcgaccaagtgctcatcacaactaactcggagggtcagaagttc
gtcaaagttcgtgttcggtcaacgcgtattcctcaaatcggagacaagttcgcctcgcgt
cacggtcagaagggtactattggtatcgcttaccggcaagaggacatgcctttcacggcg
gaaggtatcgtccccgatctcatcatcaaccctcacgccattccttcccgtatgacaatc
ggtcacttggtcgagtgtttgctctccaaggtcgcaactctcattggtaacgaaggtgat
gccacgcctttcactgacctcacggtcgagggtgtttccactttcctgcgccagagaggg
taccaatcgcgtggtcttgaagtcatgtaccacggtcacactggtcgcaaactccaagcg
caggtataccttggaccgacgtactaccagcgtctcaagcacatggtggacgacaagatt
cactcgcgcgctcgtggaccggtccagatccttactaggcagcctgtggaaggtcgtagt
cgtgacggtggtttgcgtttcggagagatggagcgcgactgtatgatttcccatggtatt
gctggattcttgaaggaacgtttgttcgatgcaagcgacgcttaccgacttcatgtttgt
gatatttgcggtttgacggccattgccaacctcaaaaagcaaagcttcgagtgtcgtgca
tgcaagaacaagacggcttgctcgcagctgtatatcccttatgcggccaagcttctcttc
caagaattgcagagcatgaacattgccgctcgtttatatacagtttcttctggccgtata
cgggattaa
DBGET
integrated database retrieval system
