Cinclus cinclus (white-throated dipper): 134041585
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Entry
134041585 CDS
T10813
Symbol
PTCHD4
Name
(RefSeq) patched domain-containing protein 4 isoform X1
KO
K24682
patched domain-containing protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
134041585 (PTCHD4)
Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
Other domain-containing proteins
Patched domain-containing proteins
134041585 (PTCHD4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
134041585
NCBI-ProteinID:
XP_062344413
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All DBs
Position
3:complement(6239601..6320434)
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AA seq
904 aa
AA seq
DB search
MCFLRRPGASAGWIWWRMLRQVIHRGLQSFFYKLGLFVSRHPVFFLTVPAVLTIIFGFSL
LNRFQPDTDLESLVAPSHSLAKIERSLASSLFSLDQSKSQLYSDLHTPGRYGRVILLSKP
GGNILHQADVILQIHRAVLEMKVNYKGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQA
ALSNKTTARVQVSYPNTKLKDGRSSFIGHQLGGVMEVPNSKDQRVKSARAIQITYYLQTY
GSVTQDLIGEKWESEFCKLMHKMQLDHQDLQLYSLASFSLWKDFHQTSLLARGKILVSLM
LILLTATLSSSMKDCLRSKPFLGLLGVLTICISSVTAAGIFFITDGKYNSTLLGIPFFAM
GHGTKGVFELLSGWRRTRENLPFKDRVADAYSDVMVSYTMTSSLYFIAFGMGASPFTNIE
AVKVFCQNMCVSILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLDRKPVWF
QTMMNDGHQHTSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGC
LQINDGANIINLLASESPSVSYALIQQKYFSNYSPVIGFYIYEPLEYWNGTVQEDLKTLS
QGFNTVSWIEQYYQYLRVGNISATNKSDFISILQSSFLKKPEFQHFKNDIIFSKAGDENN
IIASRLYLVARTSENTQREAVELLEKLRPLSLIQSIKFIVFNPTFVFMDHYGLSVTMPVL
ISGFGILLVLILTFFLVIHPLGNFWLILSVTSIELGVLGLMTLWNVDMDCISILCLIYTL
NFAIDHCAPLLYTFVLATEHTRTQCIKNSLQEHGTAILQNVSSFLIGLVPLLFVPSNLTF
TLFKCLLLAGSCTLLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDH
VTAV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtgctttctaagacggccaggagcatctgcaggctggatctggtggaggatgctgcgg
caggtgatacacagagggctccagtcgtttttctacaagctgggcttattcgtgagcagg
catccggtgtttttcctcactgtgcccgcagtcctgaccatcatcttcggcttcagcctg
ctcaaccgcttccagcctgacactgacctggagagcctggtagcccccagccacagcctg
gccaagatcgagaggagcttagccagcagccttttctccctcgatcaatccaaaagccag
ctgtattcggacttgcacaccccggggaggtatggcagggtgattctcctctccaaaccc
ggaggcaatattttgcatcaggctgatgtgatcctgcagatccaccgagccgtgctggaa
atgaaggtgaactacaaaggctataattatactttttcccatctgtgtgtgttgagaaat
caggataagaaatgcgtgctggatgatattatttcagtgctagaggatctgaggcaggct
gccctctccaataagacaacagccagggtgcaagtgagctatcccaacactaaattaaag
gatggaaggagcagtttcattggccaccagctcggaggggtcatggaagtgccaaacagc
aaggaccagagagtcaaatcagccagagccatccaaatcacttactacctccaaacgtat
ggctctgtcacccaggacctcattggggagaagtgggagagcgaattctgtaaactgatg
cacaagatgcagctggatcaccaggatctgcagctctactcactagcgtcctttagccta
tggaaggacttccaccagaccagtcttttggccaggggcaagattttggtgagcctgatg
ctgattctcctgactgctaccctctcgagctccatgaaggactgcctgcgtagcaaacct
ttcctgggactcctgggagtactcactatctgtatttccagtgtcactgcggcagggata
tttttcattactgatggaaaatataattctactctgttgggaatccctttcttcgctatg
ggtcacggaaccaaaggagtgtttgaacttctttcaggatggcggcggaccagagagaat
ctgccattcaaggaccgagtagcagatgcctactcagatgtcatggtctcctatacgatg
acaagctccttgtatttcatagccttcggcatgggggcaagccctttcaccaacatcgaa
gctgtaaaagtcttctgccagaacatgtgtgtctccatcctgttgaactacttctacatc
ttctctttctttggctcctgcctggtctttgctggccagctggagcagaaccggtaccac
agcatcttctgctgtaaaatcccctcggcagaatacctggaccggaaacctgtgtggttc
cagaccatgatgaatgatggccatcagcacacttcacaccacgagaccaacccttaccag
caccactttatccagcatttcctccgagagcactataatgagtggattaccaacatctac
gttaagccatttgtggtgatactgtatctcatctatgcctctttctcctttatggggtgc
ttacagattaatgacggagccaacatcatcaaccttcttgccagtgagtccccaagcgtc
tcctatgccctcatacagcaaaagtatttcagcaactacagccctgtgataggcttctac
atctacgaacctctggagtactggaatggtactgtacaagaagacctaaaaacactcagc
caggggttcaacactgtgtcctggattgaacagtattaccaataccttcgagtgggtaac
atcagtgcaaccaacaaaagtgactttatcagcatcctccagagctcctttttaaaaaag
ccagaattccagcacttcaaaaatgacattattttctccaaagctggagatgagaacaac
ataattgcttctcgtttgtaccttgtggccaggactagtgaaaacacacagagggaagca
gtggaattgctggagaagctgaggccactttctcttatacagagcatcaagttcattgtg
ttcaaccctacttttgttttcatggaccactatggtttatcagtaactatgcctgtcctg
atttctggttttggcatcctgctggtgttaatactgacctttttcctggttatccaccct
ctgggaaatttctggttaattctcagtgtcacctcaatagagctgggtgtccttggcttg
atgaccttatggaatgtagacatggactgcatttctattctgtgccttatctacactttg
aattttgccatagatcactgtgcacccctgctttatacatttgtattagctactgagcac
acccgaactcagtgtataaagaactccctccaagagcatgggacagccattttgcagaac
gtttcttcctttcttatcgggttggtcccccttctctttgtgccttcaaacttgaccttc
acactgttcaaatgcttgctgcttgctggcagttgcacacttctgcactgttttgttatt
ttgccagtctttctaacctttttcccaccttccaaaaagcaccacaagaaaaagaaacgg
gccaaaaggaaggaacgagaagagatcgaatgcatagagattcaggagaatcctgatcat
gttacagcagtctga
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