Cinclus cinclus (white-throated dipper): 134046513
Help
Entry
134046513 CDS
T10813
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134046513 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134046513 (EXOSC7)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134046513 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
134046513 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
134046513
NCBI-ProteinID:
XP_062353037
LinkDB
All DBs
Position
1:44951860..44972068
Genome browser
AA seq
290 aa
AA seq
DB search
MASVVLSEAEKFYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGETDILV
GIKAEMGTPKLEKPDEGYLEFFVDCSSNSPELEGRGGEELGTDIANTLYRVFSCENSVDL
KSLCINPKEHCWVLYVDVLLLECGGNIFDAISIAVKAALFNTRVPKVRVLEDEEGTKEIE
LSDDPYDCIRLNVDEVPCIVTLSKIGYRHVVDATLQEEACSLASLLISVTNKGAITSMKK
VGKGSLDPESIFEMMETGQRVGKSLHIALQKILDEEESLGTSRPKVGFLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggtgctaagcgaggctgagaagttttacatcgtgcacggcgtccaggaa
gaccttcgtgtagatggtcggggctgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcaaacacaagtggatctgcaagagtaaagctgggagaaactgacatcttggta
ggcataaaagctgaaatggggacaccaaagttggagaaaccagacgaaggttacctggaa
ttttttgttgactgttcttcaaattctcctgaattggaaggccggggaggagaagaactt
ggcacagacatagcaaatacgctgtacagagtattcagctgcgagaacagtgtagacttg
aaatccctttgtattaatcccaaagagcactgctgggttctgtatgtggatgtattgtta
ctggaatgtggtgggaacatctttgatgcaatctctattgcagtgaaggcagctctcttt
aacacaagagtacccaaagtgcgtgttctggaggatgaagaaggcaccaaagagattgag
ctgtcagatgatccttatgactgtattcgacttaatgtagatgaggtgccttgtattgtc
acactaagcaaaattggatataggcatgtggtggatgctacccttcaggaagaagcctgt
tctttggcaagcctgcttatttcagtgacgaataaaggtgccatcacttctatgaagaag
gtggggaaaggtagcctggatcctgagagtatttttgaaatgatggagacaggacaaaga
gtaggcaagtcacttcacatagcccttcagaagattttggatgaagaagagagtttgggg
acttcacgaccaaaagttggatttctaggatga
DBGET
integrated database retrieval system
