Cinclus cinclus (white-throated dipper): 134048590
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Entry
134048590 CDS
T10813
Symbol
SLC6A11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134048590 (SLC6A11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccic02000
]
134048590 (SLC6A11)
Transporters [BR:
ccic02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134048590 (SLC6A11)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134048590
NCBI-ProteinID:
XP_062356426
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Position
12:complement(20971452..21055946)
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AA seq
620 aa
AA seq
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MTAEKTIPIINGKPEDALDPEASSTNLVHSNDKKVHERGHWNNKVEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWASCGHEWNTENCVEFQKLNMSNCS
QVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGK
VVYVTATFPYIMLMILLIRGVTLPGASEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAI
CLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAE
SGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVCVESIVTAVVDMYPKVFRR
GYRRELLILGLSIVSYFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFECVCIGWVYG
SNRFYENIEDMIGYKPVSLIKWCWMVLTPGICAGIFIFFLVKYKPLKYNNVYIYPDWGYG
IGWMMALSSMVCIPLWICIKLWKTEGTFMEKFRKLITPSSDLKMRGKLGGGAYIAAINDC
DAKRKGDGTISTITEKETHF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaaaagactattcctataattaatggcaagccagaagatgctttggacccg
gaagcttcaagtaccaaccttgttcacagcaatgataagaaagttcatgaaagaggccac
tggaacaataaggttgaatttgtgctttctgtagcaggggagattattgggttgggaaac
gtctggagattcccatatctttgctacaagaatggaggaggtgctttcctcatcccctat
gtggtcttttttatttgctgtggaataccagtatttttcttggagacggccttgggacag
tttacaagtgaaggaggcatcacatgctggaggaaagtttgccctctctttgaaggcatt
ggctatgctacccaagttatagaggcacacctaaatgtgtattacatcatcattttagca
tgggctatcttttatttgttcaactgctttactacagagcttccctgggcttcctgtggc
cacgaatggaatacagaaaactgtgtggaatttcaaaaacttaacatgagcaactgcagt
caagtctctttacagaatgccacctctccagtgatggaattctgggaacgaagggtgctg
gcaatttccgatgggatcgagcacattgggaacctgcgctgggagctcgccctgtgcctc
ctggctgcttggactatttgttatttctgcatctggaaaggcaccaaatccactggaaag
gttgtgtacgtgacagccacgttcccctacatcatgctgatgatcctcctgattcggggg
gtgacgttacccggcgcttccgagggcatcaagttctacctttaccccgacatctcccgc
ctctctgacccacaggtgtgggtggatgctggcacacaaatctttttctcctatgccatc
tgcttggggtgcctgacagccctggggagctacaacaattacaacaacaactgctacaga
gactgcatcatgctctgctgcttgaacagtggcacaagctttgttgctggttttgctatc
ttttcagttcttggatttatggcttatgaacaaggcgtgcccattgcagaagttgcagaa
tcaggaccaggacttgcattcattgcttaccctaaagctgtcaccatgatgcctctgtct
cctctgtgggcagctctgttcttcatgatgctcatcttcctgggcttggacagtcagttt
gtgtgcgtggaaagcatcgtgacagccgtggtggacatgtaccccaaggtgttccgcagg
ggctacaggagggagctgctcatcctcggcctctccatcgtgtcctacttcctgggcctc
atcatgttaactgagggtgggatgtatgtctttcagctctttgactcctatgcagccagt
gggatgtgcctgctctttgttgccatttttgagtgcgtctgcataggctgggtatatggc
agcaatcgcttttatgagaacattgaagacatgattgggtacaaacctgtgtcattgatt
aagtggtgctggatggtcctaactccaggtatttgtgcaggcatcttcatctttttcctg
gtgaaatacaagcccctgaaatacaacaatgtgtacatctaccctgactggggctatggc
atcgggtggatgatggcgctgtcctccatggtctgcatcccactgtggatctgcatcaag
ctctggaagacagaaggcaccttcatggagaaattcaggaagttgattacacctagctca
gacctgaaaatgcggggcaagctcggaggaggagcctacattgcagcaataaatgactgc
gatgccaaacggaaaggagatggcaccatttccaccatcacagaaaaggagacacatttc
tga
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