Cinclus cinclus (white-throated dipper): 134050143
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Entry
134050143 CDS
T10813
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134050143 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccic01001
]
134050143 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134050143 (TAF1)
03036 Chromosome and associated proteins [BR:
ccic03036
]
134050143 (TAF1)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
134050143 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
134050143 (TAF1)
Protein kinases [BR:
ccic01001
]
Serine/threonine kinases: Other
TAF1 family
134050143 (TAF1)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134050143 (TAF1)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
134050143 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
134050143
NCBI-ProteinID:
XP_062358990
LinkDB
All DBs
Position
15:complement(4047386..4076399)
Genome browser
AA seq
1901 aa
AA seq
DB search
MSDSESEEEADGGRTEPFSLAGFLFGNINEAGQLEGDSVLDKESKKHLAGLGVLGLGNLI
TEITASEEESAESEGAHLDEEGWVKSTEDAVDYSDINEVAEDESRRYKQAMGSLQPARRP
DEDEDDYDADCEDIDSKLMPPPPPPPVPGKKEDEKDAAATGIMQRDASKQLPSVTELFPE
FRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELAQEVQIQEGEVVVESGVEGKSPW
EYEFAAPPPPEQCLSDDEITMMAPVESKFSQSTGDIDKVTDTKPKVAEWRYGPAQLWYDM
LGIPEDGSGFDYGFKLKEENEQEAKGHTDDGDAESTKEKDDLLADEHFLMVTQLQWEDDV
IWNGEDVKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNSPIPLAQKPNVA
GVLGIAKCKEKAPEQQVSLDEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAMETYLDPPV
LTLDPNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQP
EVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFHRPP
LKKYSFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLI
LAEYSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQL
LQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQECPLYEVPGPNSKRA
NTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDS
NWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDF
QMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDK
EPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARS
GEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEE
MGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGEDNGNDKDRGKKDRRDKKGLSSAA
SANSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYCRIRTT
KDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDL
KLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEG
TKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTD
PMVTLSSILEGIINDIRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYP
SREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLD
DDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLETIRKNISKH
KYQNRETFLDDVNLILANSIKYNGSDSQYTKTAQEIVNICYQTLAEYDEHLTQLERDIST
AKEAALEEADLESLDPMTPGPYTPQPPDLYDTSTSLSVSHGASFYQDESNLSAMDTPITT
TGKRGTQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDADGDLADEEEGSAQQP
QASVLYEDLLMSDGEDDDDGSDEEGDNPFSSIQLSESGSDSDVEPSAVRPKQPHVLQENT
RMGMDNEESMMSYEGDGGETSHVMEDSNISYGSYEEPDPKSNTRDTSFSSIGGYEISEEE
EEEEQQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcggagagcgaggaggaggcggacggcggccgcaccgagcccttctccctg
gccggcttcctcttcggcaacatcaatgaggcggggcagctggaaggggacagcgtcctc
gacaaggaatccaagaagcacctggctgggctgggcgtgctggggctgggcaacctcatc
accgagatcaccgccagcgaggaggagagcgccgagagcgagggagcacacctggacgag
gaaggctgggttaagagcacagaggatgctgttgattattcagacatcaatgaagtggca
gaagatgagagccgtcggtacaagcaggcgatgggcagcctgcagccagctcgaaggcca
gatgaagatgaggatgactatgatgctgactgtgaagacattgattccaagctgatgcca
ccaccaccaccacctccagtacctggaaaaaaagaagatgaaaaggatgcagctgccact
ggaatcatgcagcgagatgcttccaaacagttgccaagtgttacagagctcttcccagaa
tttcgaccaggcaaggtgctgcgtttcctgcgtctctttggccctgggaagaacgttccg
tcggtctggcgaagcgcccggaggaaacgcaagaagaagcatcgggagttggcacaggaa
gtgcagatacaggagggtgaagttgtggttgagagtggagtggaaggaaaatctccttgg
gagtatgagtttgctgctcctccccctcctgagcagtgcctttcagatgatgagattacc
atgatggcacctgtggagtcaaaattttcccagtcgactggtgacatagacaaggtgaca
gacacaaagcccaaggtggccgagtggcgctatggccctgcccagctctggtatgacatg
ctgggcatccccgaggatggcagcgggtttgattatggcttcaagctaaaggaggagaac
gagcaggaggctaaaggacacacagatgatggggatgcagagtcaacaaaggagaaagat
gatctgctagctgatgagcacttcctcatggtaacgcagctccagtgggaggatgatgtc
atctggaatggggaggatgtcaagcacaaagggactaagacacagcgtgcgagcttggca
ggctggctgccatccagcatgaccagaaatgccactgcatacaatgcccaacaaggtttg
aaccgcagtggctctttgctcaattcaccaattcctctagcacagaaacccaatgtagca
ggagtcctgggcatagcaaagtgcaaggaaaaggcccctgaacagcaagtttctctggat
gaagacaagccctggtactccattttcccaattgataatgaagagttagtgtatggccgt
tgggaagacaatatcatctgggatgatcaggcaatggaaacctacttggatccccctgtc
ttaacactggatccaaacgatgaaaacataattctagaaattcctgatgaaaaggaagag
atgactttgaactctccatccaaggagaacaagaaggaatcttctctgaagaagagtagg
atcctgttgggaaaaacaggtgtcatcaaggaagaaccacagcagaacatgtctcagcca
gaggtgaaggatccctggaacctctccaatgatgagttttactaccccaaacagcaggga
cttcgaggaacctttggaggcaacatcatccagcactctatcccagcagtggagctccgc
cagccattctttcccacccacatgggtcccatgaagctccgacaattccatcggcctccc
ctgaagaaatattcctttggtgccttgtcccagcccgggccccacgctgtgcagcctctg
ctgaagcacatcaagaagaaagccaagatgagggagcaggagcgccaggcctctggtggg
ggggagatgttcttcatgcgcacaccacaggacctcactggcaaggatggagatctcatc
cttgctgagtacagtgaggagaacgcccctctgatgatgcaggttggcatggcaacaaag
attaaaaattactacaaaaggaaacctggcaaagatccaggagctccagactgtaaatat
ggagagactgtttattgtcacacttctcccttcctgggttctctgcatccaggccagtta
ctgcaggcatttgaaaacaatcttttccgggcccccatctatttacacaagatgcctgaa
acagatttcctgattatccggacacgacaaggctactacattcgagaattagtggatatt
tttgtagttgggcaggagtgccccctctatgaagtacctggtcccaactccaagcgagct
aacacacatatcagagacttcctgcaggtttttatctatcggctcttctggaagagcagg
gaccgtccgcggaggatccgcatggaggacatcaagaaggcttttccctcccactccgag
agcagcatccgcaagcggctgaagctctgtgctgatttcaaacgcacagggatggactca
aactggtgggttttaaagccggatttcaggttgccaacagaggaggagatcagagccatg
gtgtccccagagcagtgctgtgcctattacagcatgattgcagccgagcagaggctcaag
gatgcaggttatggggagaaatccttctttgctccagaagaggagaatgaagaggatttc
caaatgaagattgatgatgaggtgcgcacggctccctggaacaccacacgagccttcatt
gctgctatgaagggcaagtgcctcctggaagtgactggagtcgcagatcccactggttgt
ggagaaggattttcttatgtcaagattccaaacaaaccaacccagcagaaggatgataaa
gaacctcagccagtgaagaagacagtgactggcacagacgcggatttgcgccgactttcc
ctcaaaaatgccaaacagcttctgcggaaatttggagtgcctgaggaggagatcaagaag
ctgtcccgatgggaagtgattgatgtggtccgtacgatgtccacagagcaggcacgctca
ggggaagggcccatgagcaaatttgcccgtggctctcggttctctgtggcagaacatcag
gagagatacaaagaagagtgtcagcgcatctttgacttacaaaataaggttctggagtcc
actgagatcctgtcaacagacacagatagcagttcagctgaagacagtgactttgaagag
atgggaaagaatattgagaatatgttacagaacaagaaaactagttctcagctctctcgg
gagagagaagagcaggaacggaaggaattgcaaaggatgctcctgggagaagacaatggc
aatgacaaagacagaggcaaaaaggacaggagagacaaaaaggggctgtcttcagctgcc
tcagcaaactctcacaaggatgatgacactgcctctgtgaccagcctgaattcctctgcc
accggccgccgcctcaagatctatcgcacgttcagggacgaggatgggaaggaatacgtg
aggtgtgagacggtgcggaaacccgcggtcattgacgcctactgccgcatacggaccacc
aaggatgaggagttcatacggaagtttgctctatttgatgagcagcaccgtgaggagatg
cggaaggagcggcgcaggatccaggagcaattacggcggctaaagcggaaccaagagaaa
gagaaactcaagggccctccagaaaagaagcccaagaaaatgaaagagcgtccagacttg
aaactaaaatgtggagcatgcggtgcaattgggcacatgaggactaataagttctgtcct
ctttactaccaaacaaatgccccaccttctaatcctgttgcaatgacagaggagcaggag
gaagagctggaaaaaacagtcattcacaatgacaatgaagagctcatcaaagttgaagga
acgaagattgtcctgggaaaacaactgattgagagtgctgatgaggttcgcaggaaatcc
ctggtcctgaagtttcccaagcagcagcttcctccaaagaagaagcgtcgcgtagggaca
acggtgcactgtgattatctcaatcgtccccataaatccatccatcggcggcgaacagat
cctatggtgacactctcatccatcttggagggcatcatcaatgacatcagagatcttccc
aatacatatccctttcacacgcctgtaaacccaaaagttgtcaaagattattataagatc
attactcggcccatggatttacagaccctgcgtgagaacgtccgtaagaggcagtaccca
tcccgggaggagttcagggaacacctggagctcattgtgaagaacagtgccacatacaat
gggccaaagcactcactgacacagatatcccagtccatgcttgacctgtgtgatgaaaaa
ctaaaagagaaggaagataaactggctcgattggaaaaagcaattaatcctctcctggat
gatgatgatcaagtggccttttccttcattttggataacattgtgactcaaaagatgatg
gcagttccagattcttggccatttcaccatccagttaacaaaaagtttgttcctgattat
tacaaggtgattgctaatccaatggatctggagaccatccgcaagaatatctccaaacac
aaataccagaacagggagactttcctggatgatgttaacctcatccttgccaacagcatt
aagtacaatgggtcagacagccagtacacaaaaacagcccaggagattgtaaacatctgt
taccagactttagctgagtatgatgaacacctgactcaactcgagagagacatctctact
gctaaggaagcagcactggaggaggcagatctggaaagtcttgatccaatgacccctggt
ccctacactccacagccaccagatttgtatgataccagcacttccctcagtgtgtcccat
ggtgcttcattctatcaagatgaaagcaatttgtctgctatggacactcccatcactacc
acagggaagcgaggaactcagatgcgccaggggcggggtaggctgggcgaggaagactct
gacgtggatattgaaggatttgatgaggatgatgatgggaagcctaagactccagcccca
gaagttgaagatgcagatggtgaccttgctgatgaagaagaaggatcagcccagcagccc
caggccagtgtcctctatgaagacttgcttatgtctgatggagaggatgatgatgatggg
agtgatgaagagggagacaatcctttctcatctatccagctgagtgagagtggcagtgac
tcagatgtggagcccagcgcagtgagacccaaacaacctcatgttcttcaagagaacaca
cggatgggcatggacaatgaagaaagcatgatgtcctatgaaggggatggtggggagaca
tctcatgttatggaggacagcaatatcagttatggcagctacgaagaaccagacccaaag
tccaacacaagagacacgagtttcagcagcattggagggtatgagatctcagaagaggag
gaagaggaagaacagcagcgctcaggaccgagtgtcttaagtcaggtccatctgtctgag
gatgaggaggacagcgaggactttcattccattgcaggagacagtgacctggactcagat
gaatga
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integrated database retrieval system
