Cephus cinctus (wheat stem sawfly): 107264734
Help
Entry
107264734 CDS
T07523
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107264734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccin03021
]
107264734
Enzymes [BR:
ccin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107264734
Transcription machinery [BR:
ccin03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107264734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Motif
Other DBs
NCBI-GeneID:
107264734
NCBI-ProteinID:
XP_015588786
UniProt:
A0AAJ7RBD1
LinkDB
All DBs
Position
Unknown
AA seq
1710 aa
AA seq
DB search
MSKQFRPSFQMSVRHLDPKQLMFSIFTVDDIRNLSVTKISTPLSFNVLGHPLRGGLYDPT
LGPLDEKSDPCGTCGGNNMKCPGHFGHIDLPMPVVNPLFHKGLYMLIKLSCLSCFTLQVP
KHIKLLLSAKLKLLQEGFLGEIDNLEHEVLSVVPSTHELQDGELEYVQQVINAYIQNLYN
RERFNLNNSGMALDSFNTKNNNVQWHTLVDKALKQFTAGKICVNCRQPILKITTLKNKIM
TIKHANTSMDESDARVTTHKLENVFIMPDQSKEYLRQLWQNEKDTLKVILPCLGTINLEF
PTDVFFFEVIPVLPPIVRPVNFLNGQMIEHPQSQVYKAIIQDCLVLRNIIQTIQDGDTNK
LPEEGRIVFEQIKGSTAVEKLHNAWQTLQANVDHLMDRELSRTTESANCQGLKQVIEKKE
GIIRMHMMGKRVNFAARSVITPDPNLNIDEIGIPEAFALKLTYPVPVTPWNVTELRQMIL
NGPDVHPGAVMVESEDGFTNRIDGNNTTQKEAIAKRLLTTSGKANKFFQGIKIVHRHLIN
GDILLLNRQPTLHKPSIMAHKARILKGERTLRLHYANCKAYNADFDGDEMNAHFPQNELA
RSEGYFIANVSNQYLVPKDGTPLSGLIQDHMISGVHLTKRGQFFTRDDYMQLVYSALSVV
QGELVLLPPAIIKPIPLWSGKQIVSTVIINITPRGQARINLSAGAKINAREWQIRKPRRW
KCGVEFKDPKTMSEAEVFIRGGELLSGVLDKTHYGATPYGLVHCIFELYGGSCSSKLLSA
FGKLFQAFLQIHGFTLGIKDILILPDADKKRKNIINKSRKIGEELQKAVLELPEDTPMEV
VTAKMEENYGTNPKFRTQVDRKYKTALDVFTNDINKTCLPSGLLKKFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAFDPTPRSGGFIDGRFMTGIQPQ
EFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVISYDSTVRDSDGSLIQLSYGED
GLDIPKSRFLRKEQLGFLVDNKDAIIDRDLLQHLKETSDVHKILKLVKKIRKFTKTNNGI
TKKRRESEFTKFSATDFGINPMRYKKIDENTGRSKAALSIMKRWLKSDPEVKNSFKSQCV
QCPDPVTSKYRQDLEYGVLNENIESLISDYMSDNIGKASAVINKKELRDLLCVKVMNTLC
PPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSME
IPFKKDLRNVTRQSNKLRQKLTKCVVSNVLRNIKVERKIETCPQRQLTYSLTFEFLPHKS
YKGEFCINPKHILEKTEKLFFTVMFREIKKIAKLSGTTMLHFEEDRKRTNEEDSRLDDDD
PDDDLSSKPNPRSDLGELHESSDEDEAAEDADATAARTMSRHKENQEYEDPEEEEVEDAA
NENADESQFVEKTKTTQKEEEEEEEEDKDDEDPMADIKSDQKKRDVINMYPNVTEYDYDN
QKHVWCKLTFWLPLKLTRLDLSTVLRNVADKVVLWETPCIRRAFTFQNSNGETILKTDGL
NIVEMFKYNKILDLQKLYSNDIYGISQTYGIEAANRVIVKEVKDVFKMYGITVDMRHLLL
IADYMTFDGNYQPLSRKGMEDSASPLQQMSFESSLNFLKNATLQGKQDDLVSPSSRLMLG
QPCRSGTGACSLLMKMQSDKFATNYMSVGG
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaattcagaccttcgtttcaaatgtctgtgagacatttggatccaaaacag
ttaatgttttcaattttcactgtggatgatatcagaaatttgagtgtaactaaaatcagt
acacccttgtcgtttaatgttctggggcatccattaagaggaggactctatgatccaaca
ttaggacctttggatgaaaaatcagatccatgtgggacatgcgggggcaataacatgaag
tgccctggacactttggccatatagatctaccaatgcctgttgtgaatccactttttcac
aaaggattatatatgctaataaaattatcatgcttatcatgtttcacattgcaagtgcca
aaacatataaagctattactctctgcaaaactgaagcttctccaagaaggatttcttggc
gagattgataatttggaacatgaagtattatcagtagttcctagtacacatgaacttcaa
gatggagaattagaatatgtgcagcaagttattaatgcatatatacagaatctatataat
agagaaagatttaatttaaacaattcaggaatggcattagatagcttcaatactaaaaat
aacaacgttcaatggcatacactcgtcgacaaagccctgaaacaatttactgctggcaaa
atatgtgtaaactgtcgccaaccaatccttaagatcacaacgctcaagaataaaattatg
accattaaacatgccaacaccagcatggatgagtcagatgctcgtgttacgacgcataag
ctagaaaatgtttttataatgccagaccaatcgaaggaatacttgcggcaactatggcag
aatgaaaaagatactttaaaagttattctaccatgtctgggtacgataaacctggaattt
cctactgacgtatttttctttgaagtaatacctgtactaccacctatagtcaggcctgtt
aattttttgaatggtcaaatgatagaacatccacagtctcaagtctataaggctatcatt
caggattgcttggttctcagaaatattatacagactattcaggatggagatacgaataaa
ttaccagaagaaggacggatcgtatttgaacaaataaaaggaagcactgcagtagaaaaa
ttgcataatgcttggcagacactacaagcaaatgtggatcatttaatggaccgtgagctc
agtcgaactacagaatccgccaattgtcaaggactaaaacaagttattgagaaaaaagag
ggtatcattcgtatgcatatgatgggtaaaagggtcaattttgcagctcgttctgttatc
acgcctgatccaaatttaaatatcgatgagattggtataccggaagcatttgctctaaag
ttaacatatcctgtgcctgtgactccttggaacgtaactgaattgcgtcaaatgattctg
aatggacctgacgtgcatcctggcgcagtaatggtcgaaagcgaagatggttttacaaat
cgtattgatggaaataatacaactcaaaaggaagcgatagcgaagcgcttgctgacaaca
agtggaaaggcaaataaatttttccaaggtattaaaatagtgcatcgacatttaattaat
ggtgatattctattgttgaatcgtcaacctactttacacaagccaagtataatggctcac
aaggcacggatactcaaaggcgagaggaccttgcgtctccactacgctaattgtaaagct
tataatgctgattttgatggcgatgaaatgaatgcacattttccgcagaacgaactcgca
cggagcgaaggatatttcatagctaatgtatcgaatcagtatcttgtaccaaaagacgga
actcctttaagtggtttaattcaagatcatatgatttccggagttcacctaacaaagaga
gggcagtttttcacaagggatgattatatgcaactggtttattcagcgttatcagttgta
caaggggaattagtattgcttccaccagctattataaaaccaattcctctttggtccgga
aagcaaattgtatcgactgtcattataaatattacccctcgtggtcaagctaggattaat
ttgagtgctggtgccaaaataaatgcgagagaatggcaaattagaaaaccgcgacgctgg
aaatgtggtgtcgaattcaaagatcccaaaactatgtctgaggctgaagtctttattcgt
ggtggagaattactttctggtgtcttggataaaactcattacggagccactccttacggt
cttgtacactgtatttttgaactttatggaggatcttgttctagtaaattactaagtgct
tttggcaagctctttcaagctttcttgcaaatacacggttttaccttgggaattaaagat
attctgatcctgccagatgctgataaaaaacgcaaaaatatcattaacaaatccaggaag
ataggagaggaattacaaaaagctgttcttgaattaccagaagatacgccaatggaggtg
gtaacagcaaaaatggaagaaaactatggaacaaatccgaagttccgcactcaggtcgat
aggaagtacaaaactgctttagacgtttttacaaatgacattaacaaaacatgtttacca
tccggtcttctgaaaaaattcccagaaaacaatttacaactgatggttcaatctggagct
aaaggttccaccgtgaacactatgcagatatcctgcttactgggacaaattgaattagaa
gggaagcgtccacccttaatgattagcggaaaaagcttaccaagctttcccgcctttgat
ccaactccaagatccggtggttttattgacggacgtttcatgacaggaattcaacctcaa
gaattctttttccattgtatggccggtcgtgaaggtcttatcgacacagccgtaaaaaca
agtcgttcgggatatcttcagagatgtctaattaagcatttagaaggactggttattagt
tatgattcaacggtacgagattcagatggtagtttaattcaattatcctatggagaagat
ggtctagatattccaaagtctcgatttttgagaaaggagcagctggggttcttggtagac
aataaagacgccattatcgatcgtgatctattgcaacatctcaaagagacttcagatgtg
cataagattttaaagttagtgaagaagatacgcaaatttaccaaaacgaacaatggaatt
accaagaagagacgagaaagtgaattcacaaagttctctgctaccgactttggtatcaat
ccgatgagatataagaagattgacgaaaatactggcagaagtaaagctgctttgtctata
atgaagaggtggctaaagtctgatccagaagtgaaaaattcattcaaatcacagtgtgtt
cagtgtcctgatcccgtgacatcgaaatatagacaagatttggaatatggtgttctcaat
gaaaatatcgagagccttataagtgattatatgtcagataatattggcaaagcttctgct
gttatcaacaaaaaggaattaagagatctcctttgtgtaaaagtaatgaatacactttgt
ccacctggtgaaccagtgggtttattagcagcacaatccattggagaaccttctactcag
atgacattaaacactttccatttcgctggtcgtggtgagatgaacgttacactgggtatt
ccgcgattaagagagattctaatgatggcttcgaagaacattaaaactccaagcatggaa
attcctttcaaaaaggacttacgtaatgtgacaagacaatctaacaagttaagacagaag
ttaacgaagtgcgtggtatcaaatgtactgagaaatataaaagtggaaagaaaaattgag
acttgccctcagcggcaactcacgtatagcttgacctttgagtttctaccccataaaagt
tacaagggtgaattctgcattaatccaaaacacatcctagaaaagaccgaaaaactattc
ttcacggtaatgttccgagagatcaagaaaattgcaaagctatcaggaacgacaatgtta
cattttgaggaagatagaaaacgcaccaatgaagaggatagtagacttgacgatgatgat
ccagacgatgatctatcttcaaaaccaaatcctcgttcagacctgggtgaattgcacgaa
tcttctgatgaagatgaagctgctgaggatgcggatgctactgcagcaagaacaatgtct
aggcataaagagaatcaagagtatgaagatcccgaagaagaggaagtggaagatgctgct
aatgaaaatgctgatgaatcgcagtttgttgaaaagacaaagactacacagaaggaagaa
gaagaagaagaagaggaagataaagatgatgaagacccaatggctgatataaaaagtgat
cagaaaaaaagagatgttataaatatgtatccgaatgtcacagaatatgattacgataat
cagaaacacgtatggtgtaagcttactttttggttaccattgaaactcactagactagac
ttgtctactgtattaagaaacgtggcagataaggtagtactgtgggaaacaccctgtata
agacgtgcttttacattccaaaattcaaatggtgaaacgatcctcaaaacagatggttta
aatatagtggaaatgttcaaatacaacaagatactcgacctgcaaaagctttattccaat
gacatttacggaatttcacaaacgtacggtatcgaagcagcgaatagagttatagtcaag
gaagtaaaagacgtgttcaaaatgtatggaattactgtggatatgagacacttattatta
attgctgattatatgactttcgatggaaattatcagccacttagtcgtaaaggaatggaa
gattcagcttcgcctttgcaacaaatgagctttgaaagttctttgaatttcttaaaaaat
gcaactctacaaggaaaacaagatgatcttgtttctccatcaagtcgattaatgctgggt
cagccttgtaggtcaggaactggagcatgctctttattgatgaagatgcagtctgacaag
tttgcaacaaattatatgtccgtgggtggctga
DBGET
integrated database retrieval system
