Cephus cinctus (wheat stem sawfly): 107268573
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Entry
107268573 CDS
T07523
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107268573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107268573
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107268573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107268573
NCBI-ProteinID:
XP_015596977
UniProt:
A0AAJ7BXR5
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MREVILSHCEKNFVNKAIDKETRLDGRQLLEARPVNIHFGSNWGCCIVSLGRTKAIAQVS
CDIQKPKASRPNEGMLHINVELNPMAAPFFEAGRQSDPSVQINRQLERCLKDSKCIDLES
LCIVADKKAWNLRVDINIINHDGNLVDCASIAALAALMHFHRPDVSSSEEEIIIHSFAEK
DPLPLTIYHHPVCISFLVFENGNTIMDPTYLEEKVGVAQLTMGINSYRELCSLDFNYLTR
TSVADVIPTISNQAANYAAELVSLIKESVRQDVEARYKKEVKNFGRFENCIATDKLTAMF
TDKIPIKLSSWGKMDDREDEIMEDQKENEQIIKINKNSAELLLLKGDLFGNGGVNTWQND
SSSDDEEESSDEVVMVEETKTKCHVLDDIELSEDSEEEETQNMTKDDIQT
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagttatattatcacattgtgaaaaaaatttcgtgaataaggcaatcgacaaa
gaaacgagactcgatggccggcaattattggaagctaggcctgtcaatatacattttgga
tctaattggggatgctgtattgtttccttgggtcgaacaaaagctattgcgcaagtatct
tgtgatattcaaaaaccaaaagcttcaagaccaaatgaaggaatgttacatataaatgtg
gaattaaatccaatggctgcacctttttttgaagcaggacgccaatcagatccatctgtt
caaataaatcgtcagcttgagcgttgtcttaaagattcaaaatgcattgatttggaatcc
ctctgcatcgtagcagataaaaaagcttggaatctgcgtgtggatatcaatattataaat
catgatggaaatcttgtagactgtgcatctatagctgcattagctgcattaatgcacttt
cacaggccagatgtgagctccagcgaagaggaaattattatccattcgtttgctgagaaa
gatcctttaccattaactatatatcatcacccagtatgcatctcctttttagtatttgaa
aatggcaacaccatcatggatccgacttatcttgaggaaaaggtcggcgtagcacagtta
acaatgggaataaattcatatagagaattgtgtagcttggattttaattatttaaccaga
acttcagtagctgatgttataccaactatttcaaatcaagctgccaattatgcagctgaa
ctcgtgagcctcatcaaggaatccgttcgacaggatgttgaagctcgatataagaaggaa
gtgaagaactttggacgctttgagaattgcatagcaacagataagttgacagcaatgttc
acagataaaattccaataaaattatcatcatgggggaaaatggatgacagagaagacgaa
ataatggaggatcaaaaggaaaatgaacaaatcatcaagataaacaaaaattcagctgag
ctgctactcttaaaaggagatttgtttggaaatgggggagtgaacacctggcaaaatgat
tcatcgtcagatgatgaagaggaatcttccgatgaagtagtaatggtggaagaaactaaa
acaaaatgccatgtcttggatgatatagaactcagtgaggacagtgaagaagaggagacg
caaaatatgactaaggatgatatccagacgtga
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